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Started by timer Running as SYSTEM Building remotely on Ubuntu_18.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/SCKAN Connectivity [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] Done The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://github.com/ABI-Software/scicrunch-knowledge-testing.git > git init /home/cmiss/Jenkins/workspace/SCKAN Connectivity # timeout=10 Fetching upstream changes from https://github.com/ABI-Software/scicrunch-knowledge-testing.git > git --version # timeout=10 > git --version # 'git version 2.25.1' > git fetch --tags --force --progress -- https://github.com/ABI-Software/scicrunch-knowledge-testing.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/ABI-Software/scicrunch-knowledge-testing.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/main^{commit} # timeout=10 Checking out Revision fe848d322413b5f7ce9474a3d7736b65b52de3b8 (refs/remotes/origin/main) > git config core.sparsecheckout # timeout=10 > git checkout -f fe848d322413b5f7ce9474a3d7736b65b52de3b8 # timeout=10 Commit message: "Merge pull request #10 from dbrnz/update-mapknowledge" > git rev-list --no-walk fe848d322413b5f7ce9474a3d7736b65b52de3b8 # timeout=10 [SCKAN Connectivity] $ /bin/sh -xe /tmp/shiningpanda13668588391232817857.sh + export SCICRUNCH_API_HOST=https://scicrunch.org/api/1/elastic/SPARC_PortalDatasets_pr + pip install -r requirements.txt Collecting mapknowledge@ https://github.com/AnatomicMaps/map-knowledge/releases/download/v0.13.1/mapknowledge-0.13.1-py3-none-any.whl Downloading https://github.com/AnatomicMaps/map-knowledge/releases/download/v0.13.1/mapknowledge-0.13.1-py3-none-any.whl (18 kB) Requirement already satisfied: requests==2.27.1 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from -r requirements.txt (line 1)) (2.27.1) Requirement already satisfied: algoliasearch==2.6.2 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from -r requirements.txt (line 2)) (2.6.2) Requirement already satisfied: boto3==1.17.67 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from -r requirements.txt (line 3)) (1.17.67) Requirement already satisfied: certifi>=2017.4.17 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from requests==2.27.1->-r requirements.txt (line 1)) (2022.9.24) Requirement already satisfied: charset-normalizer~=2.0.0 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from requests==2.27.1->-r requirements.txt (line 1)) (2.0.12) Requirement already satisfied: urllib3<1.27,>=1.21.1 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from requests==2.27.1->-r requirements.txt (line 1)) (1.26.12) Requirement already satisfied: idna<4,>=2.5 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from requests==2.27.1->-r requirements.txt (line 1)) (3.4) Requirement already satisfied: botocore<1.21.0,>=1.20.67 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from boto3==1.17.67->-r requirements.txt (line 3)) (1.20.112) Requirement already satisfied: jmespath<1.0.0,>=0.7.1 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from boto3==1.17.67->-r requirements.txt (line 3)) (0.10.0) Requirement already satisfied: s3transfer<0.5.0,>=0.4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from boto3==1.17.67->-r requirements.txt (line 3)) (0.4.2) Requirement already satisfied: networkx<3.0.0,>=2.8.8 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from mapknowledge@ https://github.com/AnatomicMaps/map-knowledge/releases/download/v0.13.1/mapknowledge-0.13.1-py3-none-any.whl->-r requirements.txt (line 4)) (2.8.8) Requirement already satisfied: rdflib<7.0.0,>=6.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/5a3744f0/virtualenvs/d41d8cd9/lib/python3.8/site-packages (from mapknowledge@ https://github.com/AnatomicMaps/map-knowledge/releases/download/v0.13.1/mapknowledge-0.13.1-py3-none-any.whl->-r requirements.txt (line 4)) (6.2.0) INFO: pip is looking at multiple versions of boto3 to determine which version is compatible with other requirements. This could take a while. Collecting boto3==1.17.67 Using cached boto3-1.17.67-py2.py3-none-any.whl (131 kB) INFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while. INFO: pip is looking at multiple versions of algoliasearch to determine which version is compatible with other requirements. This could take a while. Collecting algoliasearch==2.6.2 Using cached algoliasearch-2.6.2-py2.py3-none-any.whl (35 kB) INFO: pip is looking at multiple versions of requests to determine which version is compatible with other requirements. This could take a while. Collecting requests==2.27.1 Using cached requests-2.27.1-py2.py3-none-any.whl (63 kB) INFO: pip is looking at multiple versions of boto3 to determine which version is compatible with other requirements. This could take a while. ERROR: Cannot install -r requirements.txt (line 2), -r requirements.txt (line 4) and requests==2.27.1 because these package versions have conflicting dependencies. The conflict is caused by: The user requested requests==2.27.1 algoliasearch 2.6.2 depends on requests<3.0 and >=2.21 mapknowledge 0.13.1 depends on requests<3.0.0 and >=2.28.1 To fix this you could try to: 1. loosen the range of package versions you've specified 2. remove package versions to allow pip attempt to solve the dependency conflict ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts [notice] A new release of pip available: 22.3.1 -> 23.0.1 [notice] To update, run: pip install --upgrade pip Build step 'Virtualenv Builder' marked build as failure [Slack Notifications] found #106 as previous completed, non-aborted build [Slack Notifications] will send OnEveryFailureNotification because build matches and user preferences allow it Finished: FAILURE