Changes

Customize code for manual run
 (commit: f9fc98e)

Create segmentation testing script
 (commit: 0f779bb)

Update biolucida testing

Fix a issue on using redirect viewer
 (commit: 98aa7d3)

Update manifest_name_to_discover_name.py
 (commit: 4fdd62a)

Update if statement
 (commit: 28f4c9b)

Fix issue when multiple xml file in one folder
 (commit: 8c5244b)

Fix issue on s3 request
 (commit: eea8d0a)

Fix issue when scicrunch and s3 name not match

Usually name will match but path not match
 (commit: 36f6b59)

Make sure (additional) mimetype is correctly used
 (commit: 2f6b224)

Check for duplicate segmentation
 (commit: ca38657)

Update segmentation_tests.py
 (commit: d1218c8)

Follow the new item generate flow in the portal
 (commit: 0a0a50d)

Rename and add mapping control
 (commit: 2c553e4)

Modify biolucida testing report

Add warning option
 (commit: d8ae2dd)

Add B to S path mapping file generation code
 (commit: 6dbda6c)

Remove certain errors

duplicate biolucida id exists in Scicrunch
 (commit: e779b85)

Update dataset_list
 (commit: 48f81d2)

Remove unused mapping
 (commit: b02e176)

Add more info to segmentation report

set default MAPPING_IMPLEMENTATION to False
 (commit: c47a9a9)

Add more info to output files
 (commit: 001a2b4)

Remove reports from .gitignore

This is needed in jenkins.
 (commit: b2a4e01)

Create basic plot testing script
 (commit: 06b8ffe)

Done plot testing script
 (commit: 27987f1)

Tidy up
 (commit: 6b66f17)

Split tests into different testing methods
 (commit: c2780e3)

Fix issue when no fileType field in Pennsieve file
 (commit: b25165e)

Tidy up
 (commit: 375f791)

Update README.rst
 (commit: 8f03ef4)

Update message
 (commit: ab98be9)

Add testing for duplicate biolucida object
 (commit: d59cb32)