Skipping 50 KB..
Full Log return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:561: in get_dataset_info_title
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
----------------------------- Captured stdout call -----------------------------
____________________ test_object_identifier_dataset_search _____________________
client = <FlaskClient <Flask 'app.main'>>
def test_object_identifier_dataset_search(client):
#Dataset 212
print()
identifier = "package:b5f9e5d7-7e09-4855-a923-a966454967d7"
start = timer()
> r = client.get('/dataset_info/using_object_identifier', query_string={'identifier': identifier})
tests/test_dataset_info.py:231:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:569: in get_dataset_info_object_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
----------------------------- Captured stdout call -----------------------------
___________________ test_pennsieve_identifier_dataset_search ___________________
client = <FlaskClient <Flask 'app.main'>>
def test_pennsieve_identifier_dataset_search(client):
print()
identifier = "43"
start = timer()
> r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': identifier})
tests/test_dataset_info.py:259:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
----------------------------- Captured stdout call -----------------------------
__________________________ test_scicrunch_dataset_doi __________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_dataset_doi(client):
# Testing with dataset 55
identifier = "55"
> run_doi_test = check_doi_status(client, identifier, '10.26275/pzek-91wx')
tests/test_scicrunch.py:43:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_scicrunch.py:28: in check_doi_status
r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id})
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_____________________ test_scicrunch_multiple_dataset_doi ______________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_multiple_dataset_doi(client):
# Testing with dataset 55 and 68
> run_doi_test_1 = check_doi_status(client, "55", '10.26275/pzek-91wx')
tests/test_scicrunch.py:59:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_scicrunch.py:28: in check_doi_status
r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id})
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_____________________ test_scicrunch_multiple_dataset_ids ______________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_multiple_dataset_ids(client):
# Testing with dataset 55 and 68
> r = client.get('/dataset_info/using_multiple_discoverIds/?discoverIds=55&discoverIds=68')
tests/test_scicrunch.py:77:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:553: in get_dataset_info_discoverIds
return process_results(dataset_search(query))
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
____________________________ test_scicrunch_search _____________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_search(client):
> r = client.get('/search/heart')
tests/test_scicrunch.py:88:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:673: in kb_search
return process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
____________________________ test_scicrunch_filter _____________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_filter(client):
> r = client.get('/filter-search/', query_string={'term': 'organ', 'facet': 'heart'})
tests/test_scicrunch.py:99:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_______________________ test_scicrunch_filter_scaffolds ________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_filter_scaffolds(client):
> r = client.get('/filter-search/?facet=scaffolds&term=datasets')
tests/test_scicrunch.py:104:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_________________________ test_scicrunch_basic_search __________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_basic_search(client):
> r = client.get('/filter-search/Heart/?facet=All+Species&term=species')
tests/test_scicrunch.py:109:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_________________________ test_scicrunch_boolean_logic _________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_boolean_logic(client):
> r = client.get('/filter-search/?facet=All+Species&term=species&facet=male&term=gender&facet=female&term=gender')
tests/test_scicrunch.py:114:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
______________________ test_scicrunch_combined_facet_text ______________________
client = <FlaskClient <Flask 'app.main'>>
def test_scicrunch_combined_facet_text(client):
> r = client.get('/filter-search/heart/?facet=All+Species&term=species&facet=male&term=gender&facet=female&term=gender')
tests/test_scicrunch.py:119:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_________________________ test_create_identifier_query _________________________
client = <FlaskClient <Flask 'app.main'>>
def test_create_identifier_query(client):
> r = client.get('/dataset_info/using_object_identifier?identifier=package:e6435710-dd9c-46b7-9dfd-932103469733')
tests/test_scicrunch.py:131:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:569: in get_dataset_info_object_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
____________________________ test_response_version _____________________________
client = <FlaskClient <Flask 'app.main'>>
def test_response_version(client):
# Testing with dataset 44
identifier = "44"
doi = "10.26275/duz8-mq3n"
> run_doi_test = check_doi_status(client, identifier, doi)
tests/test_scicrunch.py:178:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_scicrunch.py:28: in check_doi_status
r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id})
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
____________________________ test_response_abi_plot ____________________________
client = <FlaskClient <Flask 'app.main'>>
def test_response_abi_plot(client):
# Testing abi-plot with dataset 212
identifier = "212"
doi = "10.26275/lok5-wje6"
> run_doi_test = check_doi_status(client, identifier, doi)
tests/test_scicrunch.py:193:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_scicrunch.py:28: in check_doi_status
r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id})
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
__________________________ test_response_abi_scaffold __________________________
client = <FlaskClient <Flask 'app.main'>>
def test_response_abi_scaffold(client):
# Testing abi-scaffold with dataset 76
identifier = "76"
doi = "10.26275/jarb-s8jw"
> run_doi_test = check_doi_status(client, identifier, doi)
tests/test_scicrunch.py:227:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tests/test_scicrunch.py:28: in check_doi_status
r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id})
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:588: in get_dataset_info_pennsieve_identifier
return reform_dataset_results(dataset_search(query))
app/scicrunch_process_results.py:107: in reform_dataset_results
kb_results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
______________________ test_response_sample_subject_size _______________________
client = <FlaskClient <Flask 'app.main'>>
def test_response_sample_subject_size(client):
# Only filter search returns the sample and subjectSuze
> r = client.get('/filter-search/?facet=liver&term=organ')
tests/test_scicrunch.py:283:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_________________________ test_get_body_scaffold_info __________________________
client = <FlaskClient <Flask 'app.main'>>
def test_get_body_scaffold_info(client):
# Test if we get a shorter list of uberons with species specified
> r = client.get('/get_body_scaffold_info/human')
tests/test_scicrunch.py:430:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:902: in get_body_scaffold_info
result = process_get_first_scaffold_info(dataset_search(query))
app/scicrunch_process_results.py:77: in process_get_first_scaffold_info
results = _prepare_results(results)
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
_____________________________ test_scaffold_files ______________________________
client = <FlaskClient <Flask 'app.main'>>
def test_scaffold_files(client):
> r = client.get('/filter-search/?size=30')
tests/test_scicrunch.py:470:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:696: in filter_search
results = process_results(response.json())
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
----------------------------- Captured stderr call -----------------------------
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/timestamp-query
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.64.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.64.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.64.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.32.data
WARNING:root:Unhandled mime type: application/x.vnd.cambridge-electronic-designced.spike2.resource+xml
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: application/x.vnd.hts.bam
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
WARNING:root:Unhandled mime type: text/vnd.abi.plot+thumbnail
------------------------------ Captured log call -------------------------------
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
WARNING root:scicrunch_processing_v_1_2_0.py:53 Unhandled mime type: application/timestamp-query
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_____________________ test_finding_contextual_information ______________________
client = <FlaskClient <Flask 'app.main'>>
def test_finding_contextual_information(client):
> r = client.get('/dataset_info/using_multiple_discoverIds/?discoverIds=76')
tests/test_scicrunch.py:486:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get
return self.open(*args, **kw)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open
return Client.open(
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open
response = self.run_wsgi_app(environ.copy(), buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app
rv = run_wsgi_app(self.application, environ, buffered=buffered)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app
app_rv = app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__
return self.wsgi_app(environ, start_response)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app
response = self.handle_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app
response = self.full_dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1951: in full_dispatch_request
rv = self.handle_user_exception(e)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function
return cors_after_request(app.make_response(f(*args, **kwargs)))
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1820: in handle_user_exception
reraise(exc_type, exc_value, tb)
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise
raise value
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1949: in full_dispatch_request
rv = self.dispatch_request()
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1935: in dispatch_request
return self.view_functions[rule.endpoint](**req.view_args)
app/main.py:553: in get_dataset_info_discoverIds
return process_results(dataset_search(query))
app/scicrunch_process_results.py:73: in process_results
return jsonify({'numberOfHits': results['hits']['total'], 'results': _prepare_results(results)})
app/scicrunch_process_results.py:22: in _prepare_results
m = importlib.import_module(f'app.{package_version}')
../../shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/importlib/__init__.py:127: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1030: in _gcd_import
???
<frozen importlib._bootstrap>:1007: in _find_and_load
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'app.scicrunch_processing_v_1_2_1'
import_ = <function _gcd_import at 0x7f7a2bc52310>
> ???
E ModuleNotFoundError: No module named 'app.scicrunch_processing_v_1_2_1'
<frozen importlib._bootstrap>:984: ModuleNotFoundError
=============================== warnings summary ===============================
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/__init__.py:1
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
from pkg_resources import get_distribution, DistributionNotFound
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google')`.
Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages
declare_namespace(pkg)
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google.logging')`.
Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages
declare_namespace(pkg)
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2350
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2350: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google')`.
Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages
declare_namespace(parent)
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/marshmallow/__init__.py:17
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/marshmallow/__init__.py:17: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
__version_info__ = tuple(LooseVersion(__version__).version)
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_marshmallow/__init__.py:34
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_marshmallow/__init__.py:34: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead.
__version_info__ = tuple(LooseVersion(__version__).version)
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/future/standard_library/__init__.py:65
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/future/standard_library/__init__.py:65: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
import imp
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:19
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:19: DeprecationWarning: Call to deprecated create function FileDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool.
DESCRIPTOR = _descriptor.FileDescriptor(
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:36
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:36: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool.
_descriptor.FieldDescriptor(
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:53
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:53: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool.
_descriptor.FieldDescriptor(
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:70
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:70: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool.
_descriptor.FieldDescriptor(
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:29
/home/cmiss/Jenkins/shiningpanda/jobs/c6a9534b/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:29: DeprecationWarning: Call to deprecated create function Descriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool.
_CACHESEGMENT = _descriptor.Descriptor(
tests/test_health.py::test_request_response
/home/cmiss/Jenkins/workspace/SPARC-API/tests/test_health.py:13: DeprecationWarning: Please use assertEqual instead.
assert_equals("healthy", json_response.get("status"))
-- Docs: https://docs.pytest.org/en/latest/warnings.html
=========================== short test summary info ============================
FAILED tests/test_api.py::test_non_existing_simulation_ui_file - ModuleNotFou...
FAILED tests/test_api.py::test_simulation_ui_file_old_s3_bucket - ModuleNotFo...
FAILED tests/test_api.py::test_simulation_ui_file_new_s3_bucket - ModuleNotFo...
FAILED tests/test_dataset_info.py::test_generic_mouse_colon_dataset_search - ...
FAILED tests/test_dataset_info.py::test_complex_title_dataset_search - Module...
FAILED tests/test_dataset_info.py::test_title_plot_annotation_dataset_search
FAILED tests/test_dataset_info.py::test_object_identifier_dataset_search - Mo...
FAILED tests/test_dataset_info.py::test_pennsieve_identifier_dataset_search
FAILED tests/test_scicrunch.py::test_scicrunch_dataset_doi - ModuleNotFoundEr...
FAILED tests/test_scicrunch.py::test_scicrunch_multiple_dataset_doi - ModuleN...
FAILED tests/test_scicrunch.py::test_scicrunch_multiple_dataset_ids - ModuleN...
FAILED tests/test_scicrunch.py::test_scicrunch_search - ModuleNotFoundError: ...
FAILED tests/test_scicrunch.py::test_scicrunch_filter - ModuleNotFoundError: ...
FAILED tests/test_scicrunch.py::test_scicrunch_filter_scaffolds - ModuleNotFo...
FAILED tests/test_scicrunch.py::test_scicrunch_basic_search - ModuleNotFoundE...
FAILED tests/test_scicrunch.py::test_scicrunch_boolean_logic - ModuleNotFound...
FAILED tests/test_scicrunch.py::test_scicrunch_combined_facet_text - ModuleNo...
FAILED tests/test_scicrunch.py::test_create_identifier_query - ModuleNotFound...
FAILED tests/test_scicrunch.py::test_response_version - ModuleNotFoundError: ...
FAILED tests/test_scicrunch.py::test_response_abi_plot - ModuleNotFoundError:...
FAILED tests/test_scicrunch.py::test_response_abi_scaffold - ModuleNotFoundEr...
FAILED tests/test_scicrunch.py::test_response_sample_subject_size - ModuleNot...
FAILED tests/test_scicrunch.py::test_get_body_scaffold_info - ModuleNotFoundE...
FAILED tests/test_scicrunch.py::test_scaffold_files - ModuleNotFoundError: No...
FAILED tests/test_scicrunch.py::test_finding_contextual_information - ModuleN...
====== 25 failed, 72 passed, 3 skipped, 14 warnings in 248.73s (0:04:08) =======
Build step 'Virtualenv Builder' marked build as failure
[Slack Notifications] found #882 as previous completed, non-aborted build
[Slack Notifications] will send OnEveryFailureNotification because build matches and user preferences allow it
Finished: FAILURE
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