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Started by user Noel Building remotely on Ubuntu_16.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/PhysiomeJournal_website > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/Physiome/journal-website # timeout=10 Fetching upstream changes from https://github.com/Physiome/journal-website > git --version # timeout=10 > git fetch --tags --progress https://github.com/Physiome/journal-website +refs/heads/*:refs/remotes/origin/* > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10 Checking out Revision 7141c104121bacead55bf73e72e968df71de1520 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 7141c104121bacead55bf73e72e968df71de1520 > git rev-list 7141c104121bacead55bf73e72e968df71de1520 # timeout=10 [PhysiomeJournal_website] $ /bin/sh -xe /tmp/shiningpanda7875352350533098277.sh + make deps pip install -r py-requirements.txt Requirement already satisfied: pelican>3.6 in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from -r py-requirements.txt (line 1)) Requirement already satisfied: markdown in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from -r py-requirements.txt (line 2)) Requirement already satisfied: python-dateutil in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: feedgenerator>=1.9 in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: docutils in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: blinker in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: pygments in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: jinja2>=2.7 in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: unidecode in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: pytz>=0a in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: six>=1.4 in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from pelican>3.6->-r py-requirements.txt (line 1)) Requirement already satisfied: MarkupSafe>=0.23 in /home/cmiss/Jenkins/shiningpanda/jobs/b6ec0b39/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from jinja2>=2.7->pelican>3.6->-r py-requirements.txt (line 1)) + make html pelican /home/cmiss/Jenkins/workspace/PhysiomeJournal_website/content -o /home/cmiss/Jenkins/workspace/PhysiomeJournal_website/output -s /home/cmiss/Jenkins/workspace/PhysiomeJournal_website/pelicanconf.py Done: Processed 10 articles, 0 drafts, 5 pages and 0 hidden pages in 0.36 seconds. + scp -v -2 -r -o GlobalKnownHostsFile **** -i **** output pj-site@abiwebsrv02.bioeng.auckland.ac.nz:/home/pj-site/journaldev.physiomeproject.org/ Executing: program /usr/bin/ssh host abiwebsrv02.bioeng.auckland.ac.nz, user pj-site, command scp -v -r -d -t /home/pj-site/journaldev.physiomeproject.org/ OpenSSH_7.2p2 Ubuntu-4ubuntu2.1, OpenSSL 1.0.2g 1 Mar 2016 debug1: Reading configuration data /etc/ssh/ssh_config debug1: /etc/ssh/ssh_config line 19: Applying options for * debug1: Connecting to abiwebsrv02.bioeng.auckland.ac.nz [130.216.4.34] port 22. debug1: Connection established. debug1: identity file /home/cmiss/.ssh/id_rsa type 1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_rsa-cert type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_dsa type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_dsa-cert type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_ecdsa type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_ecdsa-cert type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_ed25519 type -1 debug1: key_load_public: No such file or directory debug1: identity file /home/cmiss/.ssh/id_ed25519-cert type -1 debug1: Enabling compatibility mode for protocol 2.0 debug1: Local version string SSH-2.0-OpenSSH_7.2p2 Ubuntu-4ubuntu2.1 debug1: Remote protocol version 2.0, remote software version OpenSSH_6.6.1p1 Ubuntu-2ubuntu2.8 debug1: match: OpenSSH_6.6.1p1 Ubuntu-2ubuntu2.8 pat OpenSSH_6.6.1* compat 0x04000000 debug1: Authenticating to abiwebsrv02.bioeng.auckland.ac.nz:22 as 'pj-site' debug1: SSH2_MSG_KEXINIT sent debug1: SSH2_MSG_KEXINIT received debug1: kex: algorithm: curve25519-sha256@libssh.org debug1: kex: host key algorithm: ecdsa-sha2-nistp256 debug1: kex: server->client cipher: chacha20-poly1305@openssh.com MAC: <implicit> compression: none debug1: kex: client->server cipher: chacha20-poly1305@openssh.com MAC: <implicit> compression: none debug1: expecting SSH2_MSG_KEX_ECDH_REPLY debug1: Server host key: ecdsa-sha2-nistp256 SHA256:nrl+uVNnKBIgl3yLEOD5DNhwRjwUUYwcQfwVtvox6as debug1: read_passphrase: can't open /dev/tty: No such device or address Host key verification failed. lost connection Build step 'Virtualenv Builder' marked build as failure Sending e-mails to: noel.zeng@auckland.ac.nz ERROR: Could not connect to SMTP host: localhost, port: 25 javax.mail.MessagingException: Could not connect to SMTP host: localhost, port: 25; nested exception is: java.net.ConnectException: Connection refused (Connection refused) at com.sun.mail.smtp.SMTPTransport.openServer(SMTPTransport.java:1934) at com.sun.mail.smtp.SMTPTransport.protocolConnect(SMTPTransport.java:638) at javax.mail.Service.connect(Service.java:295) at javax.mail.Service.connect(Service.java:176) at javax.mail.Service.connect(Service.java:125) at javax.mail.Transport.send0(Transport.java:194) at javax.mail.Transport.send(Transport.java:124) at hudson.tasks.MailSender.run(MailSender.java:131) at hudson.tasks.Mailer.perform(Mailer.java:170) at hudson.tasks.BuildStepCompatibilityLayer.perform(BuildStepCompatibilityLayer.java:81) at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20) at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:730) at hudson.model.AbstractBuild$AbstractBuildExecution.performAllBuildSteps(AbstractBuild.java:676) at hudson.model.Build$BuildExecution.post2(Build.java:186) at hudson.model.AbstractBuild$AbstractBuildExecution.post(AbstractBuild.java:621) at hudson.model.Run.execute(Run.java:1760) at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43) at hudson.model.ResourceController.execute(ResourceController.java:97) at hudson.model.Executor.run(Executor.java:415) Caused by: java.net.ConnectException: Connection refused (Connection refused) at java.net.PlainSocketImpl.socketConnect(Native Method) at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350) at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206) at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188) at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392) at java.net.Socket.connect(Socket.java:589) at com.sun.mail.util.SocketFetcher.createSocket(SocketFetcher.java:286) at com.sun.mail.util.SocketFetcher.getSocket(SocketFetcher.java:231) at com.sun.mail.smtp.SMTPTransport.openServer(SMTPTransport.java:1900) ... 18 more Finished: FAILURE