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Started by timer Running as SYSTEM Building remotely on Ubuntu_18.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/SPARC-API-DEV [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] Done The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://github.com/nih-sparc/sparc-api.git > git init /home/cmiss/Jenkins/workspace/SPARC-API-DEV # timeout=10 Fetching upstream changes from https://github.com/nih-sparc/sparc-api.git > git --version # timeout=10 > git --version # 'git version 2.25.1' > git fetch --tags --force --progress -- https://github.com/nih-sparc/sparc-api.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/nih-sparc/sparc-api.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 34c484a1899f17722648d7b9004a43197d9d0bf0 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 34c484a1899f17722648d7b9004a43197d9d0bf0 # timeout=10 Commit message: "Merge pull request #200 from ignapas/captcha-fix" > git rev-list --no-walk 34c484a1899f17722648d7b9004a43197d9d0bf0 # timeout=10 [SPARC-API-DEV] $ /bin/sh -xe /tmp/shiningpanda87333897569883932.sh + pwd + export PYTHONPATH=/home/cmiss/Jenkins/workspace/SPARC-API-DEV + export SCICRUNCH_HOST=https://scicrunch.org/api/1/elastic/SPARC_PortalDatasets_dev + export PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION=python + pip install -r requirements.txt Requirement already satisfied: api==0.0.7 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 1)) (0.0.7) Requirement already satisfied: pennsieve==6.1.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 2)) (6.1.1) Requirement already satisfied: boto3==1.17.67 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 3)) (1.17.67) Requirement already satisfied: botocore==1.20.67 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 4)) (1.20.67) Requirement already satisfied: certifi==2019.11.28 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 5)) (2019.11.28) Requirement already satisfied: chardet==3.0.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 6)) (3.0.4) Collecting Click==7.1.2 (from -r requirements.txt (line 7)) Obtaining dependency information for Click==7.1.2 from https://files.pythonhosted.org/packages/d2/3d/fa76db83bf75c4f8d338c2fd15c8d33fdd7ad23a9b5e57eb6c5de26b430e/click-7.1.2-py2.py3-none-any.whl.metadata Using cached click-7.1.2-py2.py3-none-any.whl.metadata (2.9 kB) Requirement already satisfied: docutils==0.15.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 8)) (0.15.2) Requirement already satisfied: Flask==1.1.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 9)) (1.1.1) Requirement already satisfied: flask-marshmallow==0.10.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 10)) (0.10.1) Requirement already satisfied: flask-cors==3.0.8 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 11)) (3.0.8) Requirement already satisfied: gunicorn==20.0.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 12)) (20.0.4) Requirement already satisfied: idna==2.8 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 13)) (2.8) Requirement already satisfied: itsdangerous==1.1.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 14)) (1.1.0) Requirement already satisfied: Jinja2==2.11.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 15)) (2.11.3) Requirement already satisfied: jmespath==0.9.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 16)) (0.9.4) Requirement already satisfied: MarkupSafe==1.1.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 17)) (1.1.1) Requirement already satisfied: marshmallow==3.2.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 18)) (3.2.2) Requirement already satisfied: nose==1.3.7 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 19)) (1.3.7) Requirement already satisfied: osparc==0.4.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 20)) (0.4.3) Requirement already satisfied: pillow in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 21)) (10.0.0) Requirement already satisfied: public==2019.4.13 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 22)) (2019.4.13) Requirement already satisfied: pytest in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 23)) (5.4.3) Requirement already satisfied: pymongo==3.8.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 24)) (3.8.0) Requirement already satisfied: python-dateutil==2.8.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 25)) (2.8.0) Requirement already satisfied: python-dotenv==0.10.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 26)) (0.10.3) Requirement already satisfied: query-string==2019.4.13 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 27)) (2019.4.13) Requirement already satisfied: requests==2.25.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 28)) (2.25.1) Requirement already satisfied: s3transfer==0.4.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 29)) (0.4.2) Requirement already satisfied: sendgrid==6.9.7 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 30)) (6.9.7) Requirement already satisfied: six==1.13.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 31)) (1.13.0) Requirement already satisfied: SQLAlchemy==1.3.20 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 32)) (1.3.20) Requirement already satisfied: urllib3==1.26.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 33)) (1.26.4) Requirement already satisfied: Werkzeug==0.16.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 34)) (0.16.0) Requirement already satisfied: psycopg2-binary==2.9.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 35)) (2.9.5) Requirement already satisfied: APScheduler==3.7.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 36)) (3.7.0) Requirement already satisfied: google-api-python-client==2.52.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 37)) (2.52.0) Requirement already satisfied: oauth2client==4.1.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 38)) (4.1.3) Requirement already satisfied: algoliasearch==2.6.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 39)) (2.6.2) Requirement already satisfied: contentful==1.13.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 40)) (1.13.1) Requirement already satisfied: contentful_management==2.11.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements.txt (line 41)) (2.11.0) Requirement already satisfied: configparser>=3.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (6.0.0) Requirement already satisfied: deprecated>=1.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (1.2.14) Requirement already satisfied: future>=0.15.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (0.18.3) Requirement already satisfied: futures in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (3.0.5) Requirement already satisfied: protobuf>=3.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (4.24.2) Requirement already satisfied: python-jose==3.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (3.2.0) Requirement already satisfied: pytz>=2016 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (2023.3.post1) Requirement already satisfied: rsa==4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (4.0) Requirement already satisfied: semver>=2.8.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (3.0.1) Requirement already satisfied: websocket-client>=0.57.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (1.6.2) Requirement already satisfied: docopt>=0.6 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (0.6.2) Requirement already satisfied: psutil>=5.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements.txt (line 2)) (5.9.5) Requirement already satisfied: setuptools>=3.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from gunicorn==20.0.4->-r requirements.txt (line 12)) (68.1.2) Requirement already satisfied: python-http-client>=3.2.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from sendgrid==6.9.7->-r requirements.txt (line 30)) (3.3.7) Requirement already satisfied: starkbank-ecdsa>=2.0.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from sendgrid==6.9.7->-r requirements.txt (line 30)) (2.2.0) Requirement already satisfied: tzlocal~=2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from APScheduler==3.7.0->-r requirements.txt (line 36)) (2.1) Requirement already satisfied: httplib2<1dev,>=0.15.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-python-client==2.52.0->-r requirements.txt (line 37)) (0.22.0) Requirement already satisfied: google-auth<3.0.0dev,>=1.19.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-python-client==2.52.0->-r requirements.txt (line 37)) (2.22.0) Requirement already satisfied: google-auth-httplib2>=0.1.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-python-client==2.52.0->-r requirements.txt (line 37)) (0.1.0) Requirement already satisfied: google-api-core!=2.0.*,!=2.1.*,!=2.2.*,!=2.3.0,<3.0.0dev,>=1.31.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-python-client==2.52.0->-r requirements.txt (line 37)) (2.11.1) Requirement already satisfied: uritemplate<5,>=3.0.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-python-client==2.52.0->-r requirements.txt (line 37)) (4.1.1) Requirement already satisfied: pyasn1>=0.1.7 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from oauth2client==4.1.3->-r requirements.txt (line 38)) (0.5.0) Requirement already satisfied: pyasn1-modules>=0.0.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from oauth2client==4.1.3->-r requirements.txt (line 38)) (0.3.0) Requirement already satisfied: ecdsa<0.15 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from python-jose==3.2.0->pennsieve==6.1.1->-r requirements.txt (line 2)) (0.14.1) Requirement already satisfied: py>=1.5.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (1.11.0) Requirement already satisfied: packaging in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (23.1) Requirement already satisfied: attrs>=17.4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (23.1.0) Requirement already satisfied: more-itertools>=4.0.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (10.1.0) Requirement already satisfied: pluggy<1.0,>=0.12 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (0.13.1) Requirement already satisfied: wcwidth in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest->-r requirements.txt (line 23)) (0.2.6) Requirement already satisfied: wrapt<2,>=1.10 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from deprecated>=1.2.0->pennsieve==6.1.1->-r requirements.txt (line 2)) (1.15.0) Requirement already satisfied: googleapis-common-protos<2.0.dev0,>=1.56.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-api-core!=2.0.*,!=2.1.*,!=2.2.*,!=2.3.0,<3.0.0dev,>=1.31.5->google-api-python-client==2.52.0->-r requirements.txt (line 37)) (1.60.0) Requirement already satisfied: cachetools<6.0,>=2.0.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from google-auth<3.0.0dev,>=1.19.0->google-api-python-client==2.52.0->-r requirements.txt (line 37)) (5.3.1) Requirement already satisfied: pyparsing!=3.0.0,!=3.0.1,!=3.0.2,!=3.0.3,<4,>=2.4.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from httplib2<1dev,>=0.15.0->google-api-python-client==2.52.0->-r requirements.txt (line 37)) (3.1.1) Using cached click-7.1.2-py2.py3-none-any.whl (82 kB) Installing collected packages: Click Attempting uninstall: Click Found existing installation: click 8.1.7 Uninstalling click-8.1.7: Successfully uninstalled click-8.1.7 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. black 23.7.0 requires click>=8.0.0, but you have click 7.1.2 which is incompatible. Successfully installed Click-7.1.2 [notice] A new release of pip is available: 23.2.1 -> 24.0 [notice] To update, run: pip install --upgrade pip + pip install -r requirements-dev.txt Requirement already satisfied: pytest==5.4.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 1)) (5.4.3) Requirement already satisfied: pennsieve==6.1.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 2)) (6.1.1) Requirement already satisfied: black in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 3)) (23.7.0) Requirement already satisfied: isort in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 4)) (5.12.0) Requirement already satisfied: nose in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 5)) (1.3.7) Requirement already satisfied: packaging in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from -r requirements-dev.txt (line 6)) (23.1) Requirement already satisfied: py>=1.5.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest==5.4.3->-r requirements-dev.txt (line 1)) (1.11.0) Requirement already satisfied: attrs>=17.4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest==5.4.3->-r requirements-dev.txt (line 1)) (23.1.0) Requirement already satisfied: more-itertools>=4.0.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest==5.4.3->-r requirements-dev.txt (line 1)) (10.1.0) Requirement already satisfied: pluggy<1.0,>=0.12 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest==5.4.3->-r requirements-dev.txt (line 1)) (0.13.1) Requirement already satisfied: wcwidth in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pytest==5.4.3->-r requirements-dev.txt (line 1)) (0.2.6) Requirement already satisfied: boto3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.17.67) Requirement already satisfied: configparser>=3.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (6.0.0) Requirement already satisfied: deprecated>=1.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.2.14) Requirement already satisfied: future>=0.15.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.18.3) Requirement already satisfied: futures in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (3.0.5) Requirement already satisfied: protobuf>=3.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (4.24.2) Requirement already satisfied: python-jose==3.2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (3.2.0) Requirement already satisfied: pytz>=2016 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (2023.3.post1) Requirement already satisfied: requests>=2.18 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (2.25.1) Requirement already satisfied: rsa==4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (4.0) Requirement already satisfied: semver>=2.8.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (3.0.1) Requirement already satisfied: websocket-client>=0.57.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.6.2) Requirement already satisfied: docopt>=0.6 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.6.2) Requirement already satisfied: psutil>=5.4 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (5.9.5) Requirement already satisfied: python-dateutil>=2.8.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (2.8.0) Requirement already satisfied: six<2.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from python-jose==3.2.0->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.13.0) Requirement already satisfied: ecdsa<0.15 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from python-jose==3.2.0->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.14.1) Requirement already satisfied: pyasn1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from python-jose==3.2.0->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.5.0) Collecting click>=8.0.0 (from black->-r requirements-dev.txt (line 3)) Obtaining dependency information for click>=8.0.0 from https://files.pythonhosted.org/packages/00/2e/d53fa4befbf2cfa713304affc7ca780ce4fc1fd8710527771b58311a3229/click-8.1.7-py3-none-any.whl.metadata Using cached click-8.1.7-py3-none-any.whl.metadata (3.0 kB) Requirement already satisfied: mypy-extensions>=0.4.3 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from black->-r requirements-dev.txt (line 3)) (1.0.0) Requirement already satisfied: pathspec>=0.9.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from black->-r requirements-dev.txt (line 3)) (0.11.2) Requirement already satisfied: platformdirs>=2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from black->-r requirements-dev.txt (line 3)) (3.10.0) Requirement already satisfied: tomli>=1.1.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from black->-r requirements-dev.txt (line 3)) (2.0.1) Requirement already satisfied: typing-extensions>=3.10.0.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from black->-r requirements-dev.txt (line 3)) (4.7.1) Requirement already satisfied: wrapt<2,>=1.10 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from deprecated>=1.2.0->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.15.0) Requirement already satisfied: chardet<5,>=3.0.2 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from requests>=2.18->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (3.0.4) Requirement already satisfied: idna<3,>=2.5 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from requests>=2.18->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (2.8) Requirement already satisfied: urllib3<1.27,>=1.21.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from requests>=2.18->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.26.4) Requirement already satisfied: certifi>=2017.4.17 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from requests>=2.18->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (2019.11.28) Requirement already satisfied: botocore<1.21.0,>=1.20.67 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from boto3->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (1.20.67) Requirement already satisfied: jmespath<1.0.0,>=0.7.1 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from boto3->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.9.4) Requirement already satisfied: s3transfer<0.5.0,>=0.4.0 in /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages (from boto3->pennsieve==6.1.1->-r requirements-dev.txt (line 2)) (0.4.2) Using cached click-8.1.7-py3-none-any.whl (97 kB) Installing collected packages: click Attempting uninstall: click Found existing installation: click 7.1.2 Uninstalling click-7.1.2: Successfully uninstalled click-7.1.2 Successfully installed click-8.1.7 [notice] A new release of pip is available: 23.2.1 -> 24.0 [notice] To update, run: pip install --upgrade pip + pytest ============================= test session starts ============================== platform linux -- Python 3.9.18, pytest-5.4.3, py-1.11.0, pluggy-0.13.1 rootdir: /home/cmiss/Jenkins/workspace/SPARC-API-DEV collected 101 items tests/test_api.py FFFFFFFFFFFFFFFFFFF [ 18%] tests/test_biolucida.py .....FFFFFFFF [ 31%] tests/test_dataset_info.py FsFFssFFFFF [ 42%] tests/test_health.py . [ 43%] tests/test_monthly_stats.py ...... [ 49%] tests/test_osparc.py FFFFFFFFFFFFFF [ 63%] tests/test_pmr.py FFFFF [ 68%] tests/test_scicrunch.py F.FFFFFFFFFFFFFFFFF.FFFFFF [ 94%] tests/test_segmentation_info.py FF [ 96%] tests/test_thumbnails.py FFF [ 99%] tests/test_update_contentful_entries.py . [100%] =================================== FAILURES =================================== _____________________ test_direct_download_url_small_file ______________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_url_small_file(client): small_s3_file = '76%2F2%2Ffiles%2Fderivative%2FScaffold%2FmouseColon_metadata.json' > r = client.get(f"/s3-resource/{small_s3_file}") tests/test_api.py:20: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ----------------------------- Captured stdout call ----------------------------- Error while setting featured dataset id: 'NoneType' object has no attribute 'init_index' ----------------------------- Captured stderr call ----------------------------- --- Logging error --- Traceback (most recent call last): File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 12, in init_algolia_client return SearchClient.create(APP_ID, API_KEY) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/search_client.py", line 53, in create config = SearchConfig(app_id, api_key) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/configs.py", line 63, in __init__ super(SearchConfig, self).__init__(app_id, api_key) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/configs.py", line 17, in __init__ app_id = os.environ["ALGOLIA_APP_ID"] if app_id is None else app_id File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/os.py", line 679, in __getitem__ raise KeyError(key) from None KeyError: 'ALGOLIA_APP_ID' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/lib/python3.9/logging/__init__.py", line 1083, in emit msg = self.format(record) File "/usr/lib/python3.9/logging/__init__.py", line 927, in format return fmt.format(record) File "/usr/lib/python3.9/logging/__init__.py", line 663, in format record.message = record.getMessage() File "/usr/lib/python3.9/logging/__init__.py", line 367, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Call stack: File "/usr/lib/python3.9/threading.py", line 937, in _bootstrap self._bootstrap_inner() File "/usr/lib/python3.9/threading.py", line 980, in _bootstrap_inner self.run() File "/usr/lib/python3.9/threading.py", line 917, in run self._target(*self._args, **self._kwargs) File "/usr/lib/python3.9/concurrent/futures/thread.py", line 83, in _worker work_item.run() File "/usr/lib/python3.9/concurrent/futures/thread.py", line 58, in run result = self.fn(*self.args, **self.kwargs) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/executors/base.py", line 125, in run_job retval = job.func(*job.args, **job.kwargs) File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/main.py", line 237, in <lambda> featured_dataset_id_scheduler.add_job(lambda: set_featured_dataset_id(featuredDatasetIdSelectorTable), featured_dataset_id_trigger) File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/scripts/update_featured_dataset_id.py", line 74, in set_featured_dataset_id table_state["available_dataset_ids"] = get_all_dataset_ids() File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 25, in get_all_dataset_ids client = init_algolia_client() File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 15, in init_algolia_client logging.error('An error occured while instantiating the Algolia search client.', e) Message: 'An error occured while instantiating the Algolia search client.' Arguments: (KeyError('ALGOLIA_APP_ID'),) --- Logging error --- Traceback (most recent call last): File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 12, in init_algolia_client return SearchClient.create(APP_ID, API_KEY) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/search_client.py", line 53, in create config = SearchConfig(app_id, api_key) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/configs.py", line 63, in __init__ super(SearchConfig, self).__init__(app_id, api_key) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/algoliasearch/configs.py", line 17, in __init__ app_id = os.environ["ALGOLIA_APP_ID"] if app_id is None else app_id File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/os.py", line 679, in __getitem__ raise KeyError(key) from None KeyError: 'ALGOLIA_APP_ID' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/lib/python3.9/logging/__init__.py", line 1083, in emit msg = self.format(record) File "/usr/lib/python3.9/logging/__init__.py", line 927, in format return fmt.format(record) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/_pytest/logging.py", line 74, in format return super().format(record) File "/usr/lib/python3.9/logging/__init__.py", line 663, in format record.message = record.getMessage() File "/usr/lib/python3.9/logging/__init__.py", line 367, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Call stack: File "/usr/lib/python3.9/threading.py", line 937, in _bootstrap self._bootstrap_inner() File "/usr/lib/python3.9/threading.py", line 980, in _bootstrap_inner self.run() File "/usr/lib/python3.9/threading.py", line 917, in run self._target(*self._args, **self._kwargs) File "/usr/lib/python3.9/concurrent/futures/thread.py", line 83, in _worker work_item.run() File "/usr/lib/python3.9/concurrent/futures/thread.py", line 58, in run result = self.fn(*self.args, **self.kwargs) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/executors/base.py", line 125, in run_job retval = job.func(*job.args, **job.kwargs) File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/main.py", line 237, in <lambda> featured_dataset_id_scheduler.add_job(lambda: set_featured_dataset_id(featuredDatasetIdSelectorTable), featured_dataset_id_trigger) File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/scripts/update_featured_dataset_id.py", line 74, in set_featured_dataset_id table_state["available_dataset_ids"] = get_all_dataset_ids() File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 25, in get_all_dataset_ids client = init_algolia_client() File "/home/cmiss/Jenkins/workspace/SPARC-API-DEV/app/metrics/algolia.py", line 15, in init_algolia_client logging.error('An error occured while instantiating the Algolia search client.', e) File "/usr/lib/python3.9/logging/__init__.py", line 2064, in error root.error(msg, *args, **kwargs) File "/usr/lib/python3.9/logging/__init__.py", line 1475, in error self._log(ERROR, msg, args, **kwargs) File "/usr/lib/python3.9/logging/__init__.py", line 1589, in _log self.handle(record) File "/usr/lib/python3.9/logging/__init__.py", line 1599, in handle self.callHandlers(record) File "/usr/lib/python3.9/logging/__init__.py", line 1661, in callHandlers hdlr.handle(record) File "/usr/lib/python3.9/logging/__init__.py", line 952, in handle self.emit(record) File "/home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/_pytest/logging.py", line 310, in emit logging.StreamHandler.emit(self, record) Message: 'An error occured while instantiating the Algolia search client.' Arguments: (KeyError('ALGOLIA_APP_ID'),) ___________________ test_direct_download_url_new_bucket_file ___________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_url_new_bucket_file(client): new_s3_file = '307%2Ffiles%2Fderivative%2Fhuman_body_metadata.json' > r = client.get(f"/s3-resource/{new_s3_file}?s3BucketName=prd-sparc-discover50-use1") tests/test_api.py:27: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_direct_download_url_thumbnail ______________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_url_thumbnail(client): small_s3_file = '95/1/files/derivative%2FScaffold%2Fthumbnail.png' > r = client.get(f"/s3-resource/{small_s3_file}") tests/test_api.py:35: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_direct_download_incorrect_path ______________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_incorrect_path(client): incorrect_path = '32/4/files/?encodeBase64=true' > r = client.get(f"/s3-resource/{incorrect_path}") tests/test_api.py:42: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________________ test_direct_download_empty_path ________________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_empty_path(client): > r = client.get(f"/s3-resource/") tests/test_api.py:47: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_direct_download_url_large_file ______________________ client = <FlaskClient <Flask 'app.main'>> def test_direct_download_url_large_file(client): large_s3_file = '61%2F2%2Ffiles%2Fprimary%2Fsub-44%2Fsam-1%2Fmicroscopy%2Fsub-44sam-1C44-1Slide2p2MT_10x.nd2' > r = client.get(f"/s3-resource/{large_s3_file}") tests/test_api.py:54: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_get_owner_email _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_get_owner_email(client): # SPARC Portal user info portal_user_id = 729 portal_user_email = 'nih-data-portal@blackfynn.com' > r = client.get(f"/get_owner_email/{portal_user_id}") tests/test_api.py:65: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_get_datasets_by_project _________________________ client = <FlaskClient <Flask 'app.main'>> def test_get_datasets_by_project(client): # SPARC Portal project info portal_project_id = 'OT2OD025340' > r = client.get(f"/project/{999999}") tests/test_api.py:77: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________________ test_map_get_share_id_and_state ________________________ client = <FlaskClient <Flask 'app.main'>> def test_map_get_share_id_and_state(client): # mock json for testing test_data = { "state" : { "type" : "scaffold", "value": 1234 } } > r = client.post(f"/map/getshareid", json = {}) tests/test_api.py:88: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_scaffold_get_share_id_and_state _____________________ client = <FlaskClient <Flask 'app.main'>> def test_scaffold_get_share_id_and_state(client): # mock json for testing testData = { "state" : { "far" : 12.32, "near": 0.23 } } > r = client.post(f"/scaffold/getshareid", json = {}) tests/test_api.py:113: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_create_wrike_task ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_create_wrike_task(client): > r = client.post(f"/tasks", data={"title": "test-integration-task-sparc-api"}) tests/test_api.py:136: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_subscribe_to_mailchimp __________________________ client = <FlaskClient <Flask 'app.main'>> def test_subscribe_to_mailchimp(client): > r = client.post(f"/mailchimp_subscribe", json={}) tests/test_api.py:156: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_osparc_viewers ______________________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_viewers(client): > r = client.get('/get_osparc_data') tests/test_api.py:181: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________________________ test_sim_dataset _______________________________ client = <FlaskClient <Flask 'app.main'>> def test_sim_dataset(client): > r = client.get('/sim/dataset/0') tests/test_api.py:188: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_onto_term_lookup _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_onto_term_lookup(client): > r = client.get('/onto_term_lookup', query_string={'term': 'http://purl.obolibrary.org/obo/NCBITaxon_9606'}) tests/test_api.py:193: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_non_existing_simulation_ui_file _____________________ client = <FlaskClient <Flask 'app.main'>> def test_non_existing_simulation_ui_file(client): > r = client.get('/simulation_ui_file/137') tests/test_api.py:200: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________ test_simulation_ui_file_old_s3_bucket _____________________ client = <FlaskClient <Flask 'app.main'>> def test_simulation_ui_file_old_s3_bucket(client): > r = client.get('/simulation_ui_file/135') tests/test_api.py:205: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________ test_simulation_ui_file_new_s3_bucket _____________________ client = <FlaskClient <Flask 'app.main'>> def test_simulation_ui_file_new_s3_bucket(client): > r = client.get('/simulation_ui_file/308') tests/test_api.py:211: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________________ test_get_featured_datasets __________________________ client = <FlaskClient <Flask 'app.main'>> def test_get_featured_datasets(client): > r = client.get('/get_featured_datasets_identifiers') tests/test_api.py:217: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________________ test_image_xmp_info_2727 ___________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_xmp_info_2727(client): > r = client.get('/image_xmp_info/2727') tests/test_biolucida.py:47: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________________ test_image_xmp_info_1197 ___________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_xmp_info_1197(client): > r = client.get('/image_xmp_info/1197') tests/test_biolucida.py:57: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________________ test_image_xmp_info_850 ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_xmp_info_850(client): > r = client.get('/image_xmp_info/850') tests/test_biolucida.py:66: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_image_xmp_info_invalid_image_id _____________________ client = <FlaskClient <Flask 'app.main'>> def test_image_xmp_info_invalid_image_id(client): > r = client.get('/image_xmp_info/XYZ') tests/test_biolucida.py:76: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________________ test_image_blv_link_849 ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_blv_link_849(client): > r = client.get('/image_blv_link/849') tests/test_biolucida.py:82: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_image_blv_link_invalid_image_id _____________________ client = <FlaskClient <Flask 'app.main'>> def test_image_blv_link_invalid_image_id(client): > r = client.get('/image_blv_link/XYZ') tests/test_biolucida.py:90: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_image_search_dataset_77 _________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_search_dataset_77(client): > r = client.get('/image_search/77') tests/test_biolucida.py:96: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ________________________ test_image_search_dataset_292 _________________________ client = <FlaskClient <Flask 'app.main'>> def test_image_search_dataset_292(client): > r = client.get('/image_search/292') tests/test_biolucida.py:103: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_current_doi_list _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_current_doi_list(client): doi_stem = "doi:" start = timer() > r = client.get('/current_doi_list') tests/test_dataset_info.py:23: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________ test_generic_mouse_colon_dataset_search ____________________ client = <FlaskClient <Flask 'app.main'>> def test_generic_mouse_colon_dataset_search(client): title = "Generic mouse colon scaffold" start = timer() > r = client.get('/dataset_info/using_title', query_string={'title': title}) tests/test_dataset_info.py:132: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_complex_title_dataset_search _______________________ client = <FlaskClient <Flask 'app.main'>> def test_complex_title_dataset_search(client): title = "Spatial distribution and morphometric characterization of vagal efferents associated with the myenteric plexus of the rat stomach" start = timer() > r = client.get('/dataset_info/using_title', query_string={'title': title}) tests/test_dataset_info.py:151: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________ test_title_plot_annotation_dataset_search ___________________ client = <FlaskClient <Flask 'app.main'>> def test_title_plot_annotation_dataset_search(client): print() title = "Sympathetic nerve stimulation of mouse and rabbit hearts" start = timer() > r = client.get('/dataset_info/using_title', query_string={'title': title}) tests/test_dataset_info.py:202: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ----------------------------- Captured stdout call ----------------------------- ____________________ test_object_identifier_dataset_search _____________________ client = <FlaskClient <Flask 'app.main'>> def test_object_identifier_dataset_search(client): #Dataset 212 print() identifier = "package:b5f9e5d7-7e09-4855-a923-a966454967d7" start = timer() > r = client.get('/dataset_info/using_object_identifier', query_string={'identifier': identifier}) tests/test_dataset_info.py:231: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ----------------------------- Captured stdout call ----------------------------- ___________________ test_pennsieve_identifier_dataset_search ___________________ client = <FlaskClient <Flask 'app.main'>> def test_pennsieve_identifier_dataset_search(client): print() identifier = "43" start = timer() > r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': identifier}) tests/test_dataset_info.py:259: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ----------------------------- Captured stdout call ----------------------------- ______________________ test_name_mangling_for_s3_resource ______________________ client = <FlaskClient <Flask 'app.main'>> def test_name_mangling_for_s3_resource(client): # This test uses a file on dataset 328 which has a file where space is converted to underscore # to check the name mangling code is working > r = client.get('/s3-resource/328/1/files/derivative/mapped_Pig%207_thumbnail.jpeg?s3BucketName=prd-sparc-discover-use1') tests/test_dataset_info.py:282: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________ test_size_limit_on_mangled_s3_resource ____________________ client = <FlaskClient <Flask 'app.main'>> def test_size_limit_on_mangled_s3_resource(client): # This test checks that files that are mangled and too large will return a 413 config_download_limit = Config.DIRECT_DOWNLOAD_LIMIT # Store download limit Config.DIRECT_DOWNLOAD_LIMIT = 20 # set limit to 20 bytes to force a 413 # Use a try-except to make sure we can set the limit back try: r = client.get('/s3-resource/328/1/files/derivative/mapped_Pig%207_thumbnail.jpeg?s3BucketName=prd-sparc-discover-use1') except: pass Config.DIRECT_DOWNLOAD_LIMIT = config_download_limit # set limit back > assert r.status_code == 413 # Check we got the correct response E UnboundLocalError: local variable 'r' referenced before assignment tests/test_dataset_info.py:299: UnboundLocalError _____________________ test_osparc_start_simulation_no_post _____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_start_simulation_no_post(client): > r = client.get('/start_simulation') tests/test_osparc.py:13: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_osparc_check_simulation_no_post _____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_post(client): > r = client.get('/check_simulation') tests/test_osparc.py:18: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________ test_osparc_start_simulation_empty_post ____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_start_simulation_empty_post(client): > r = client.post("/start_simulation", json={}) tests/test_osparc.py:23: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________ test_osparc_check_simulation_empty_post ____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_empty_post(client): > r = client.post("/check_simulation", json={}) tests/test_osparc.py:28: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_osparc_start_simulation_no_data _____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_start_simulation_no_data(client): data = { } > r = client.post("/start_simulation", json=data) tests/test_osparc.py:35: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________ test_osparc_start_simulation_no_opencor_data _________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_start_simulation_no_opencor_data(client): data = { "solver": { "name": "simcore/services/comp/opencor", "version": "1.0.3" } } > r = client.post("/start_simulation", json=data) tests/test_osparc.py:46: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________ test_osparc_start_simulation_no_osparc_data __________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_start_simulation_no_osparc_data(client): data = { "solver": { "name": "simcore/services/comp/rabbit-ss-0d-cardiac-model", "version": "1.0.1" } } > r = client.post("/start_simulation", json=data) tests/test_osparc.py:57: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________ test_osparc_check_simulation_no_job_id_data __________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_job_id_data(client): data = { "solver": { "name": "simcore/services/comp/opencor", "version": "1.0.3" } } > r = client.post("/check_simulation", json=data) tests/test_osparc.py:68: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________ test_osparc_check_simulation_no_solver_data __________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_solver_data(client): data = { "job_id": "5026ff74-dc6d-4547-9166-6ae26d04b92e" } > r = client.post("/check_simulation", json=data) tests/test_osparc.py:76: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________ test_osparc_check_simulation_no_solver_name_data _______________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_solver_name_data(client): data = { "job_id": "5026ff74-dc6d-4547-9166-6ae26d04b92e", "solver": { "version": "1.0.3" } } > r = client.post("/check_simulation", json=data) tests/test_osparc.py:87: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________ test_osparc_check_simulation_no_solver_version_data ______________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_solver_version_data(client): data = { "job_id": "5026ff74-dc6d-4547-9166-6ae26d04b92e", "solver": { "name": "simcore/services/comp/opencor" } } > r = client.post("/check_simulation", json=data) tests/test_osparc.py:98: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_osparc_check_simulation_no_data _____________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_check_simulation_no_data(client): data = { } > r = client.post("/check_simulation", json=data) tests/test_osparc.py:105: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_osparc_successful_simulation _______________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_successful_simulation(client): data = { "opencor": { "model_url": "https://models.physiomeproject.org/e/611/HumanSAN_Fabbri_Fantini_Wilders_Severi_2017.cellml", "json_config": { "simulation": { "Ending point": 0.003, "Point interval": 0.001, }, "output": ["Membrane/V"] } }, "solver": { "name": "simcore/services/comp/opencor", "version": "1.0.3" } } res = { "status": "ok", "results": { "environment/time": [0.0, 0.001, 0.002, 0.003], "Membrane/V": [-47.787168, -47.74547155339473, -47.72515226841376, -47.71370033208329] } } > r = client.post("/start_simulation", json=data) tests/test_osparc.py:133: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ________________________ test_osparc_failing_simulation ________________________ client = <FlaskClient <Flask 'app.main'>> def test_osparc_failing_simulation(client): data = { "opencor": { "model_url": "https://models.physiomeproject.org/e/611/HumanSAN_Fabbri_Fantini_Wilders_Severi_2017.cellml", "json_config": { "simulation": { "Ending point": 3.0, "Point interval": 1.0, }, "output": ["Membrane/V"] } }, "solver": { "name": "simcore/services/comp/opencor", "version": "1.0.3" } } res = { "status": "nok", "description": "the simulation failed" } > r = client.post("/start_simulation", json=data) tests/test_osparc.py:171: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________________ test_pmr_latest_exposure_no_post _______________________ client = <FlaskClient <Flask 'app.main'>> def test_pmr_latest_exposure_no_post(client): > r = client.get('/pmr_latest_exposure') tests/test_pmr.py:13: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_pmr_latest_exposure_empty_post ______________________ client = <FlaskClient <Flask 'app.main'>> def test_pmr_latest_exposure_empty_post(client): > r = client.post("/pmr_latest_exposure", json={}) tests/test_pmr.py:18: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________ test_pmr_latest_exposure_workspace_with_latest_exposure ____________ client = <FlaskClient <Flask 'app.main'>> def test_pmr_latest_exposure_workspace_with_latest_exposure(client): > r = client.post("/pmr_latest_exposure", json={"workspace_url": "https://models.physiomeproject.org/workspace/486"}) tests/test_pmr.py:23: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________ test_pmr_latest_exposure_workspace_without_latest_exposure __________ client = <FlaskClient <Flask 'app.main'>> def test_pmr_latest_exposure_workspace_without_latest_exposure(client): > r = client.post("/pmr_latest_exposure", json={"workspace_url": "https://models.physiomeproject.org/workspace/698"}) tests/test_pmr.py:30: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ________ test_pmr_latest_exposure_workspace_with_invalid_workspace_url _________ client = <FlaskClient <Flask 'app.main'>> def test_pmr_latest_exposure_workspace_with_invalid_workspace_url(client): > r = client.post("/pmr_latest_exposure", json={"workspace_url": "https://some.url.com/"}) tests/test_pmr.py:37: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1039: in post return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_scicrunch_keys ______________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_keys(client): > r = client.get('/search/') tests/test_scicrunch.py:26: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________________ test_scicrunch_dataset_doi __________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_dataset_doi(client): # Testing with dataset 55 identifier = "55" > run_doi_test = check_doi_status(client, identifier, '10.26275/pzek-91wx') tests/test_scicrunch.py:68: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ tests/test_scicrunch.py:53: in check_doi_status r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id}) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_scicrunch_multiple_dataset_doi ______________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_multiple_dataset_doi(client): # Testing with dataset 55 and 68 > run_doi_test_1 = check_doi_status(client, "55", '10.26275/pzek-91wx') tests/test_scicrunch.py:84: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ tests/test_scicrunch.py:53: in check_doi_status r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id}) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_scicrunch_multiple_dataset_ids ______________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_multiple_dataset_ids(client): # Testing with dataset 55 and 68 > r = client.get('/dataset_info/using_multiple_discoverIds/?discoverIds=55&discoverIds=68') tests/test_scicrunch.py:102: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_scicrunch_search _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_search(client): > r = client.get('/search/heart') tests/test_scicrunch.py:113: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ___________________________ test_scicrunch_all_data ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_all_data(client): > r = client.get('/filter-search/') tests/test_scicrunch.py:119: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_scicrunch_filter _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_filter(client): > r = client.get('/filter-search/', query_string={'term': 'organ', 'facet': 'heart'}) tests/test_scicrunch.py:124: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _______________________ test_scicrunch_filter_scaffolds ________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_filter_scaffolds(client): > r = client.get('/filter-search/?facet=scaffolds&term=datasets') tests/test_scicrunch.py:129: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_scicrunch_basic_search __________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_basic_search(client): > r = client.get('/filter-search/Heart/?facet=All+Species&term=species') tests/test_scicrunch.py:134: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_scicrunch_boolean_logic _________________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_boolean_logic(client): > r = client.get('/filter-search/?facet=All+Species&term=species&facet=male&term=gender&facet=female&term=gender') tests/test_scicrunch.py:139: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_scicrunch_combined_facet_text ______________________ client = <FlaskClient <Flask 'app.main'>> def test_scicrunch_combined_facet_text(client): > r = client.get('/filter-search/heart/?facet=All+Species&term=species&facet=male&term=gender&facet=female&term=gender') tests/test_scicrunch.py:144: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_getting_facets ______________________________ client = <FlaskClient <Flask 'app.main'>> def test_getting_facets(client): > r = client.get('/get-facets/organ') tests/test_scicrunch.py:149: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_create_identifier_query _________________________ client = <FlaskClient <Flask 'app.main'>> def test_create_identifier_query(client): > r = client.get('/dataset_info/using_object_identifier?identifier=package:e6435710-dd9c-46b7-9dfd-932103469733') tests/test_scicrunch.py:156: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________________ test_create_anatomy_query ___________________________ client = <FlaskClient <Flask 'app.main'>> def test_create_anatomy_query(client): > r = client.get('/dataset_info/anatomy?identifier=90') tests/test_scicrunch.py:173: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_response_version _____________________________ client = <FlaskClient <Flask 'app.main'>> def test_response_version(client): # Testing with dataset 44 identifier = "44" doi = "10.26275/duz8-mq3n" > run_doi_test = check_doi_status(client, identifier, doi) tests/test_scicrunch.py:203: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ tests/test_scicrunch.py:53: in check_doi_status r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id}) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_response_abi_plot ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_response_abi_plot(client): # Testing abi-plot with dataset 212 identifier = "212" doi = "10.26275/lok5-wje6" > run_doi_test = check_doi_status(client, identifier, doi) tests/test_scicrunch.py:218: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ tests/test_scicrunch.py:53: in check_doi_status r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id}) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________________ test_response_abi_scaffold __________________________ client = <FlaskClient <Flask 'app.main'>> def test_response_abi_scaffold(client): # Testing abi-scaffold with dataset 76 identifier = "76" doi = "10.26275/jarb-s8jw" > run_doi_test = check_doi_status(client, identifier, doi) tests/test_scicrunch.py:252: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ tests/test_scicrunch.py:53: in check_doi_status r = client.get('/dataset_info/using_pennsieve_identifier', query_string={'identifier': dataset_id}) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_response_sample_subject_size _______________________ client = <FlaskClient <Flask 'app.main'>> def test_response_sample_subject_size(client): # Only filter search returns the sample and subjectSuze > r = client.get('/filter-search/?facet=liver&term=organ') tests/test_scicrunch.py:308: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_get_body_scaffold_info __________________________ client = <FlaskClient <Flask 'app.main'>> def test_get_body_scaffold_info(client): # Test if we get a shorter list of uberons with species specified > r = client.get('/get_body_scaffold_info/human') tests/test_scicrunch.py:455: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_getting_curies ______________________________ client = <FlaskClient <Flask 'app.main'>> def test_getting_curies(client): # Test if we get a shorter list of uberons with species specified > r = client.get('/get-organ-curies/') tests/test_scicrunch.py:464: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_get_related_terms ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_get_related_terms(client): # Test if we can get the uberon term of heart using the uberon term # of left ventricle > r = client.get('/get-related-terms/UBERON:0002084') tests/test_scicrunch.py:481: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________________ test_scaffold_files ______________________________ client = <FlaskClient <Flask 'app.main'>> def test_scaffold_files(client): > r = client.get('/filter-search/?size=30') tests/test_scicrunch.py:495: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _____________________ test_finding_contextual_information ______________________ client = <FlaskClient <Flask 'app.main'>> def test_finding_contextual_information(client): > r = client.get('/dataset_info/using_multiple_discoverIds/?discoverIds=76') tests/test_scicrunch.py:511: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________ test_undefined_version_dataset_search _____________________ client = <FlaskClient <Flask 'app.main'>> def test_undefined_version_dataset_search(client): # Testing with dataset 17 which is not versioned identifier = "17" doi = "10.26275/mlua-o9oj" > r = client.get('/dataset_info/using_doi', query_string={'doi': doi}) tests/test_scicrunch.py:522: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________________ test_segmentation_info ____________________________ client = <FlaskClient <Flask 'app.main'>> def test_segmentation_info(client): file_path = '43/5/files/derivative/sub-6384/sam-28_sub-6384_islet3/sub-6384_20x_MsGcg_RbCol4_SMACy3_islet3 (1).xml' > r = client.get('/segmentation_info/', query_string={'dataset_path': file_path}) tests/test_segmentation_info.py:14: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ______________________ test_segmentation_info_namespaced _______________________ client = <FlaskClient <Flask 'app.main'>> def test_segmentation_info_namespaced(client): file_path = '230/1/files/primary/sub-dorsal-4/sam-CGRP-Mouse-Dorsal-4/3D_scaffold_-_CGRP-Mice-Dorsal-4.xml' > r = client.get('/segmentation_info/', query_string={'dataset_path': file_path}) tests/test_segmentation_info.py:26: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError _________________________ test_segmentation_thumbnail __________________________ client = <FlaskClient <Flask 'app.main'>> def test_segmentation_thumbnail(client): > r = client.get('/thumbnail/segmentation?path=37/2/files/derivative/sub-54-5/TJU_3Scan_ratheart54-5_updated_06_11_19_Fiducials.xml') tests/test_thumbnails.py:13: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError __________________________ test_neurolucida_thumbnail __________________________ client = <FlaskClient <Flask 'app.main'>> def test_neurolucida_thumbnail(client): query_string = {'datasetId': 37, 'version': 3, 'path': 'files/derivative/sub-54-5/TJU_3Scan_ratheart54-5_updated_06_11_19_Fiducials.xml'} > r = client.get('/thumbnail/neurolucida', query_string=query_string) tests/test_thumbnails.py:20: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError ____________________ test_neurolucida_thumbnail_dataset_221 ____________________ client = <FlaskClient <Flask 'app.main'>> def test_neurolucida_thumbnail_dataset_221(client): query_string = {'datasetId': 221, 'version': 3, 'path': 'files/derivative/sub-M168/digital-traces/pCm168_AAV_Z_20x_191211_S3B_lx_IGS.xml'} > r = client.get('/thumbnail/neurolucida', query_string=query_string) tests/test_thumbnails.py:27: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1029: in get return self.open(*args, **kw) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/testing.py:222: in open return Client.open( ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:993: in open response = self.run_wsgi_app(environ.copy(), buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:884: in run_wsgi_app rv = run_wsgi_app(self.application, environ, buffered=buffered) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/werkzeug/test.py:1119: in run_wsgi_app app_rv = app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2463: in __call__ return self.wsgi_app(environ, start_response) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2449: in wsgi_app response = self.handle_exception(e) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_cors/extension.py:161: in wrapped_function return cors_after_request(app.make_response(f(*args, **kwargs))) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1866: in handle_exception reraise(exc_type, exc_value, tb) ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/_compat.py:39: in reraise raise value ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:2446: in wsgi_app response = self.full_dispatch_request() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1944: in full_dispatch_request self.try_trigger_before_first_request_functions() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask/app.py:1992: in try_trigger_before_first_request_functions func() app/main.py:175: in get_osparc_file_viewers viewers = req.json() ../../shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/requests/models.py:900: in json return complexjson.loads(self.text, **kwargs) /usr/lib/python3.9/json/__init__.py:346: in loads return _default_decoder.decode(s) /usr/lib/python3.9/json/decoder.py:337: in decode obj, end = self.raw_decode(s, idx=_w(s, 0).end()) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <json.decoder.JSONDecoder object at 0x7f215d7fd4c0> s = '<html style="overflow: hidden; margin: 0px; padding: 0px; height: 100%; width: 100%;"><head>\n <meta http-equiv="C...nance. You can find more informations on <a href="https://osparc.statuspage.io/">our status page</a></span>\n</body>\n' idx = 0 def raw_decode(self, s, idx=0): """Decode a JSON document from ``s`` (a ``str`` beginning with a JSON document) and return a 2-tuple of the Python representation and the index in ``s`` where the document ended. This can be used to decode a JSON document from a string that may have extraneous data at the end. """ try: obj, end = self.scan_once(s, idx) except StopIteration as err: > raise JSONDecodeError("Expecting value", s, err.value) from None E json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0) /usr/lib/python3.9/json/decoder.py:355: JSONDecodeError =============================== warnings summary =============================== /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/__init__.py:1 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/apscheduler/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html from pkg_resources import get_distribution, DistributionNotFound /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages declare_namespace(pkg) /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google.logging')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages declare_namespace(pkg) /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2350 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pkg_resources/__init__.py:2350: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('google')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages declare_namespace(parent) /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/marshmallow/__init__.py:17 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/marshmallow/__init__.py:17: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead. __version_info__ = tuple(LooseVersion(__version__).version) /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_marshmallow/__init__.py:34 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/flask_marshmallow/__init__.py:34: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead. __version_info__ = tuple(LooseVersion(__version__).version) /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/future/standard_library/__init__.py:65 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/future/standard_library/__init__.py:65: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:19 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:19: DeprecationWarning: Call to deprecated create function FileDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool. DESCRIPTOR = _descriptor.FileDescriptor( /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:36 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:36: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool. _descriptor.FieldDescriptor( /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:53 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:53: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool. _descriptor.FieldDescriptor( /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:70 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:70: DeprecationWarning: Call to deprecated create function FieldDescriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool. _descriptor.FieldDescriptor( /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:29 /home/cmiss/Jenkins/shiningpanda/jobs/7c726052/virtualenvs/d41d8cd9/lib/python3.9/site-packages/pennsieve/cache/cache_segment_pb2.py:29: DeprecationWarning: Call to deprecated create function Descriptor(). Note: Create unlinked descriptors is going to go away. Please use get/find descriptors from generated code or query the descriptor_pool. _CACHESEGMENT = _descriptor.Descriptor( tests/test_health.py::test_request_response /home/cmiss/Jenkins/workspace/SPARC-API-DEV/tests/test_health.py:13: DeprecationWarning: Please use assertEqual instead. assert_equals("healthy", json_response.get("status")) -- Docs: https://docs.pytest.org/en/latest/warnings.html =========================== short test summary info ============================ FAILED tests/test_api.py::test_direct_download_url_small_file - json.decoder.... FAILED tests/test_api.py::test_direct_download_url_new_bucket_file - json.dec... FAILED tests/test_api.py::test_direct_download_url_thumbnail - json.decoder.J... FAILED tests/test_api.py::test_direct_download_incorrect_path - json.decoder.... FAILED tests/test_api.py::test_direct_download_empty_path - json.decoder.JSON... FAILED tests/test_api.py::test_direct_download_url_large_file - json.decoder.... FAILED tests/test_api.py::test_get_owner_email - json.decoder.JSONDecodeError... FAILED tests/test_api.py::test_get_datasets_by_project - json.decoder.JSONDec... FAILED tests/test_api.py::test_map_get_share_id_and_state - json.decoder.JSON... FAILED tests/test_api.py::test_scaffold_get_share_id_and_state - json.decoder... FAILED tests/test_api.py::test_create_wrike_task - json.decoder.JSONDecodeErr... FAILED tests/test_api.py::test_subscribe_to_mailchimp - json.decoder.JSONDeco... FAILED tests/test_api.py::test_osparc_viewers - json.decoder.JSONDecodeError:... FAILED tests/test_api.py::test_sim_dataset - json.decoder.JSONDecodeError: Ex... FAILED tests/test_api.py::test_onto_term_lookup - json.decoder.JSONDecodeErro... FAILED tests/test_api.py::test_non_existing_simulation_ui_file - json.decoder... FAILED tests/test_api.py::test_simulation_ui_file_old_s3_bucket - json.decode... FAILED tests/test_api.py::test_simulation_ui_file_new_s3_bucket - json.decode... FAILED tests/test_api.py::test_get_featured_datasets - json.decoder.JSONDecod... FAILED tests/test_biolucida.py::test_image_xmp_info_2727 - json.decoder.JSOND... FAILED tests/test_biolucida.py::test_image_xmp_info_1197 - json.decoder.JSOND... FAILED tests/test_biolucida.py::test_image_xmp_info_850 - json.decoder.JSONDe... FAILED tests/test_biolucida.py::test_image_xmp_info_invalid_image_id - json.d... FAILED tests/test_biolucida.py::test_image_blv_link_849 - json.decoder.JSONDe... FAILED tests/test_biolucida.py::test_image_blv_link_invalid_image_id - json.d... FAILED tests/test_biolucida.py::test_image_search_dataset_77 - json.decoder.J... FAILED tests/test_biolucida.py::test_image_search_dataset_292 - json.decoder.... FAILED tests/test_dataset_info.py::test_current_doi_list - json.decoder.JSOND... FAILED tests/test_dataset_info.py::test_generic_mouse_colon_dataset_search - ... FAILED tests/test_dataset_info.py::test_complex_title_dataset_search - json.d... FAILED tests/test_dataset_info.py::test_title_plot_annotation_dataset_search FAILED tests/test_dataset_info.py::test_object_identifier_dataset_search - js... FAILED tests/test_dataset_info.py::test_pennsieve_identifier_dataset_search FAILED tests/test_dataset_info.py::test_name_mangling_for_s3_resource - json.... FAILED tests/test_dataset_info.py::test_size_limit_on_mangled_s3_resource - U... FAILED tests/test_osparc.py::test_osparc_start_simulation_no_post - json.deco... FAILED tests/test_osparc.py::test_osparc_check_simulation_no_post - json.deco... FAILED tests/test_osparc.py::test_osparc_start_simulation_empty_post - json.d... FAILED tests/test_osparc.py::test_osparc_check_simulation_empty_post - json.d... FAILED tests/test_osparc.py::test_osparc_start_simulation_no_data - json.deco... FAILED tests/test_osparc.py::test_osparc_start_simulation_no_opencor_data - j... FAILED tests/test_osparc.py::test_osparc_start_simulation_no_osparc_data - js... FAILED tests/test_osparc.py::test_osparc_check_simulation_no_job_id_data - js... FAILED tests/test_osparc.py::test_osparc_check_simulation_no_solver_data - js... FAILED tests/test_osparc.py::test_osparc_check_simulation_no_solver_name_data FAILED tests/test_osparc.py::test_osparc_check_simulation_no_solver_version_data FAILED tests/test_osparc.py::test_osparc_check_simulation_no_data - json.deco... FAILED tests/test_osparc.py::test_osparc_successful_simulation - json.decoder... FAILED tests/test_osparc.py::test_osparc_failing_simulation - json.decoder.JS... FAILED tests/test_pmr.py::test_pmr_latest_exposure_no_post - json.decoder.JSO... FAILED tests/test_pmr.py::test_pmr_latest_exposure_empty_post - json.decoder.... FAILED tests/test_pmr.py::test_pmr_latest_exposure_workspace_with_latest_exposure FAILED tests/test_pmr.py::test_pmr_latest_exposure_workspace_without_latest_exposure FAILED tests/test_pmr.py::test_pmr_latest_exposure_workspace_with_invalid_workspace_url FAILED tests/test_scicrunch.py::test_scicrunch_keys - json.decoder.JSONDecode... FAILED tests/test_scicrunch.py::test_scicrunch_dataset_doi - json.decoder.JSO... FAILED tests/test_scicrunch.py::test_scicrunch_multiple_dataset_doi - json.de... FAILED tests/test_scicrunch.py::test_scicrunch_multiple_dataset_ids - json.de... FAILED tests/test_scicrunch.py::test_scicrunch_search - json.decoder.JSONDeco... FAILED tests/test_scicrunch.py::test_scicrunch_all_data - json.decoder.JSONDe... FAILED tests/test_scicrunch.py::test_scicrunch_filter - json.decoder.JSONDeco... FAILED tests/test_scicrunch.py::test_scicrunch_filter_scaffolds - json.decode... FAILED tests/test_scicrunch.py::test_scicrunch_basic_search - json.decoder.JS... FAILED tests/test_scicrunch.py::test_scicrunch_boolean_logic - json.decoder.J... FAILED tests/test_scicrunch.py::test_scicrunch_combined_facet_text - json.dec... FAILED tests/test_scicrunch.py::test_getting_facets - json.decoder.JSONDecode... FAILED tests/test_scicrunch.py::test_create_identifier_query - json.decoder.J... FAILED tests/test_scicrunch.py::test_create_anatomy_query - json.decoder.JSON... FAILED tests/test_scicrunch.py::test_response_version - json.decoder.JSONDeco... FAILED tests/test_scicrunch.py::test_response_abi_plot - json.decoder.JSONDec... FAILED tests/test_scicrunch.py::test_response_abi_scaffold - json.decoder.JSO... FAILED tests/test_scicrunch.py::test_response_sample_subject_size - json.deco... FAILED tests/test_scicrunch.py::test_get_body_scaffold_info - json.decoder.JS... FAILED tests/test_scicrunch.py::test_getting_curies - json.decoder.JSONDecode... FAILED tests/test_scicrunch.py::test_get_related_terms - json.decoder.JSONDec... FAILED tests/test_scicrunch.py::test_scaffold_files - json.decoder.JSONDecode... FAILED tests/test_scicrunch.py::test_finding_contextual_information - json.de... FAILED tests/test_scicrunch.py::test_undefined_version_dataset_search - json.... FAILED tests/test_segmentation_info.py::test_segmentation_info - json.decoder... FAILED tests/test_segmentation_info.py::test_segmentation_info_namespaced - j... FAILED tests/test_thumbnails.py::test_segmentation_thumbnail - json.decoder.J... FAILED tests/test_thumbnails.py::test_neurolucida_thumbnail - json.decoder.JS... FAILED tests/test_thumbnails.py::test_neurolucida_thumbnail_dataset_221 - jso... ====== 83 failed, 15 passed, 3 skipped, 14 warnings in 613.14s (0:10:13) ======= Build step 'Virtualenv Builder' marked build as failure [Slack Notifications] found #834 as previous completed, non-aborted build [Slack Notifications] will send OnEveryFailureNotification because build matches and user preferences allow it Finished: FAILURE