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Summary

  1. Improve scicrunch testing. (commit: 13336d4) (details)
  2. Customize code for manual run (commit: f9fc98e) (details)
  3. Create segmentation testing script (commit: 0f779bb) (details)
  4. Update biolucida testing (commit: 98aa7d3) (details)
  5. Update manifest_name_to_discover_name.py (commit: 4fdd62a) (details)
  6. Update if statement (commit: 28f4c9b) (details)
  7. Fix issue when multiple xml file in one folder (commit: 8c5244b) (details)
  8. Fix issue on s3 request (commit: eea8d0a) (details)
  9. Fix issue when scicrunch and s3 name not match (commit: 36f6b59) (details)
  10. Make sure (additional) mimetype is correctly used (commit: 2f6b224) (details)
  11. Check for duplicate segmentation (commit: ca38657) (details)
  12. Update segmentation_tests.py (commit: d1218c8) (details)
  13. Follow the new item generate flow in the portal (commit: 0a0a50d) (details)
  14. Rename and add mapping control (commit: 2c553e4) (details)
  15. Modify biolucida testing report (commit: d8ae2dd) (details)
  16. Add B to S path mapping file generation code (commit: 6dbda6c) (details)
  17. Remove certain errors (commit: e779b85) (details)
  18. Update dataset_list (commit: 48f81d2) (details)
  19. Remove unused mapping (commit: b02e176) (details)
  20. Add more info to segmentation report (commit: c47a9a9) (details)
  21. Add more info to output files (commit: 001a2b4) (details)
  22. Remove reports from .gitignore (commit: b2a4e01) (details)
  23. Create basic plot testing script (commit: 06b8ffe) (details)
  24. Done plot testing script (commit: 27987f1) (details)
  25. Tidy up (commit: 6b66f17) (details)
  26. Split tests into different testing methods (commit: c2780e3) (details)
  27. Fix issue when no fileType field in Pennsieve file (commit: b25165e) (details)
  28. Tidy up (commit: 375f791) (details)
  29. Update README.rst (commit: 8f03ef4) (details)
  30. Update message (commit: ab98be9) (details)
The file was modifiedtests/slow_tests/test_datasets_tests.py (diff)
The file was modified.gitignore (diff)
The file was addedtests/slow_tests/manifest_name_to_discover_name.py
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/config.py (diff)
Commit 0f779bbc26ddf171d15da81d29a3e34209ccb47d by 87633683+ddjnw1yu
Create segmentation testing script
(commit: 0f779bb)
The file was modifiedtests/config.py (diff)
The file was modifiedtests/slow_tests/manifest_name_to_discover_name.py (diff)
The file was addedtests/slow_tests/segmentation_tests.py
The file was modifiedREADME.rst (diff)
Commit 98aa7d39ca5fa4e1ca1a65043b36d3506075e742 by 87633683+ddjnw1yu
Update biolucida testing

Fix a issue on using redirect viewer
(commit: 98aa7d3)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
Commit 4fdd62a69f8cfba7ef6391da5cd03674e22f766b by 87633683+ddjnw1yu
Update manifest_name_to_discover_name.py
(commit: 4fdd62a)
The file was modifiedtests/slow_tests/manifest_name_to_discover_name.py (diff)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit 8c5244b118e910cd014cecd38494b8c708317735 by 87633683+ddjnw1yu
Fix issue when multiple xml file in one folder
(commit: 8c5244b)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit 36f6b599f13fd930e990b6603ec0347d78a1ba06 by 87633683+ddjnw1yu
Fix issue when scicrunch and s3 name not match

Usually name will match but path not match
(commit: 36f6b59)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit 2f6b224a0a8b5bdee8220d93775d0a4dfd6458b0 by 87633683+ddjnw1yu
Make sure (additional) mimetype is correctly used
(commit: 2f6b224)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit 0a0a50d832c078c02aed0639ffe0839ff429bc7b by 87633683+ddjnw1yu
Follow the new item generate flow in the portal
(commit: 0a0a50d)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit d8ae2ddbc6c8fcbf0ed8b45d8f57432cff9c1a9a by 87633683+ddjnw1yu
Modify biolucida testing report

Add warning option
(commit: d8ae2dd)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
Commit 6dbda6ca470c6e79e7bf90e44d85f01ccbb1bc39 by 87633683+ddjnw1yu
Add B to S path mapping file generation code
(commit: 6dbda6c)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
Commit e779b85885a4c0149e4f2d703ff7a927b6c911ab by 87633683+ddjnw1yu
Remove certain errors

duplicate biolucida id exists in Scicrunch
(commit: e779b85)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/manifest_name_to_discover_name.py (diff)
Commit c47a9a967c195f76b3df39c7eff2b444bf2b1c84 by 87633683+ddjnw1yu
Add more info to segmentation report

set default MAPPING_IMPLEMENTATION to False
(commit: c47a9a9)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
Commit b2a4e012365edb452fbacf2b89de1dda59c9d912 by 87633683+ddjnw1yu
Remove reports from .gitignore

This is needed in jenkins.
(commit: b2a4e01)
The file was modified.gitignore (diff)
The file was addedtests/slow_tests/plot_tests.py
The file was modifiedtests/slow_tests/plot_tests.py (diff)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit c2780e3fa9dff47e5650c334ffdafb85aab5b320 by 87633683+ddjnw1yu
Split tests into different testing methods
(commit: c2780e3)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
Commit b25165e2dd91cf019c33adf2c230a0791060dc03 by 87633683+ddjnw1yu
Fix issue when no fileType field in Pennsieve file
(commit: b25165e)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedtests/slow_tests/plot_tests.py (diff)
The file was modifiedtests/slow_tests/biolucida_tests.py (diff)
The file was modifiedtests/slow_tests/segmentation_tests.py (diff)
The file was modifiedREADME.rst (diff)
The file was modifiedtests/slow_tests/plot_tests.py (diff)