Console Output
Started by upstream project "OpenCOR_Linux" build number 56
originally caused by:
Started by GitHub push by agarny
Building remotely on Ubuntu_16.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/OpenCOR_Linux/Slave/Ubuntu_16.04_bioeng49
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/opencor/opencor.git # timeout=10
Fetching upstream changes from https://github.com/opencor/opencor.git
> git --version # timeout=10
> git fetch --tags --progress https://github.com/opencor/opencor.git +refs/heads/*:refs/remotes/origin/*
Checking out Revision 9534d382e45e1b9f96c095c65e4ff30548628e9a (refs/remotes/origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 9534d382e45e1b9f96c095c65e4ff30548628e9a
> git rev-list 931bbaa6e64ab8ef37aa94545c474e631696bd61 # timeout=10
[Ubuntu_16.04_bioeng49] $ /bin/sh -xe /tmp/jenkins6018325095051012803.sh
+ ./clean
[44;37;1mCleaning OpenCOR...[0m
[42;37;1mAll done![0m
+ cd build
+ cmake -G Ninja -DCMAKE_C_COMPILER=/usr/bin/gcc-4.9 -DCMAKE_CXX_COMPILER=/usr/bin/g++-4.9 -DCMAKE_BUILD_TYPE=Release -DENABLE_SAMPLE_PLUGINS=ON -DENABLE_TEST_PLUGINS=ON -DENABLE_TESTS=ON ..
-- The C compiler identification is GNU 4.9.3
-- The CXX compiler identification is GNU 4.9.3
-- Check for working C compiler using: Ninja
-- Check for working C compiler using: Ninja -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler using: Ninja
-- Check for working CXX compiler using: Ninja -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Building a release version of OpenCOR using Qt 5.6.2...
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCOR_Linux/Slave/Ubuntu_16.04_bioeng49/build
+ ninja
[1/1499] Generating builddirectory.txt
[2/1499] Generating sourcedirectory.txt
[3/1499] Generating OpenCOR_fr.qm
[4/1499] Generating versiondate.txt
[5/1499] Generating tests.txt
[6/1499] Generating ui_mainwindow.h
[7/1499] Generating src/plugins/moc_solverinterface.cpp
[8/1499] Generating qrc_tests.cpp
[9/1499] Generating src/3rdparty/QtSingleApplication/src/moc_qtlocalpeer.cpp
[10/1499] Building CXX object CMakeFiles/runtests.dir/src/tests/src/testsutils.cpp.o
[11/1499] Building CXX object CMakeFiles/runtests.dir/src/tests/src/main.cpp.o
[12/1499] Building CXX object CMakeFiles/runtests.dir/qrc_tests.cpp.o
[13/1499] Generating src/3rdparty/QtSingleApplication/src/moc_qtsingleapplication.cpp
[14/1499] Generating ui_pluginsdialog.h
[15/1499] Generating ui_preferencesdialog.h
[16/1499] Generating ui_splashscreenwindow.h
[17/1499] Generating src/plugins/moc_pluginmanager.cpp
[18/1499] Generating src/plugins/moc_preferencesinterface.cpp
[19/1499] Generating src/moc_pluginsdialog.cpp
[20/1499] Generating src/moc_preferencesdialog.cpp
[21/1499] Generating src/moc_splashscreenwindow.cpp
[22/1499] Generating src/misc/moc_cliutils.cpp
[23/1499] Generating ui_checkforupdatesdialog.h
[24/1499] Generating src/moc_checkforupdatesdialog.cpp
[25/1499] Generating src/plugins/moc_plugin.cpp
[26/1499] Generating src/moc_mainwindow.cpp
[27/1499] Generating src/misc/moc_guiapplication.cpp
[28/1499] Generating src/misc/moc_guiutils.cpp
[29/1499] Generating src/plugins/moc_datastoreinterface.cpp
[30/1499] Generating qrc_i18n.cpp
[31/1499] Generating qrc_translations.cpp
[32/1499] Generating qrc_common.cpp
[33/1499] Generating qrc_ui.cpp
[34/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/checkforupdatesdialog.cpp.o
[35/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/main.cpp.o
[36/1499] Linking CXX executable runtests
[37/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/mainwindow.cpp.o
[38/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/preferencesdialog.cpp.o
[39/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/pluginsdialog.cpp.o
[40/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/splashscreenwindow.cpp.o
[41/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/cliapplication.cpp.o
[42/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/coreinterface.cpp.o
[43/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/datastoreinterface.cpp.o
[44/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/cliutils.cpp.o
[45/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/guiutils.cpp.o
[46/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/guiapplication.cpp.o
[47/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/cliinterface.cpp.o
[48/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/filehandlinginterface.cpp.o
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[50/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/filetypeinterface.cpp.o
[51/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/i18ninterface.cpp.o
[52/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/plugin.cpp.o
[53/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/plugininterface.cpp.o
[54/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/plugininfo.cpp.o
[55/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/pluginmanager.cpp.o
[56/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/preferencesinterface.cpp.o
[57/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/solverinterface.cpp.o
[58/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/viewinterface.cpp.o
[59/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/windowinterface.cpp.o
[60/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/moc_checkforupdatesdialog.cpp.o
[61/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/3rdparty/QtSingleApplication/src/qtlocalpeer.cpp.o
[62/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/3rdparty/QtSingleApplication/src/qtsingleapplication.cpp.o
[63/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/moc_mainwindow.cpp.o
[64/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/moc_preferencesdialog.cpp.o
[65/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/moc_pluginsdialog.cpp.o
[66/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/moc_splashscreenwindow.cpp.o
[67/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/moc_cliutils.cpp.o
[68/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/moc_guiapplication.cpp.o
[69/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/moc_datastoreinterface.cpp.o
[70/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/misc/moc_guiutils.cpp.o
[71/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/moc_plugin.cpp.o
[72/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/moc_pluginmanager.cpp.o
[73/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/moc_preferencesinterface.cpp.o
[74/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/plugins/moc_solverinterface.cpp.o
[75/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/3rdparty/QtSingleApplication/src/moc_qtlocalpeer.cpp.o
[76/1499] Building CXX object CMakeFiles/OpenCOR.dir/qrc_common.cpp.o
[77/1499] Building CXX object CMakeFiles/OpenCOR.dir/src/3rdparty/QtSingleApplication/src/moc_qtsingleapplication.cpp.o
[78/1499] Building CXX object CMakeFiles/OpenCOR.dir/qrc_i18n.cpp.o
[79/1499] Building CXX object CMakeFiles/OpenCOR.dir/qrc_translations.cpp.o
[80/1499] Building CXX object CMakeFiles/OpenCOR.dir/qrc_ui.cpp.o
[81/1499] Generating src/moc_sampleplugin.cpp
[82/1499] Building CXX object src/plugins/sample/Sample/CMakeFiles/SamplePlugin.dir/src/sampleutilities.cpp.o
[83/1499] Building CXX object src/plugins/sample/Sample/CMakeFiles/SamplePlugin.dir/__/__/plugininfo.cpp.o
[84/1499] Building CXX object src/plugins/sample/Sample/CMakeFiles/SamplePlugin.dir/src/moc_sampleplugin.cpp.o
[85/1499] Building CXX object src/plugins/sample/Sample/CMakeFiles/SamplePlugin.dir/src/sampleplugin.cpp.o
[86/1499] Generating src/moc_biosignalmlapiplugin.cpp
[87/1499] Building CXX object src/plugins/api/BioSignalMLAPI/CMakeFiles/BioSignalMLAPIPlugin.dir/src/moc_biosignalmlapiplugin.cpp.o
FAILED: /usr/bin/g++-4.9 -DBioSignalMLAPIPlugin_EXPORTS -DBioSignalMLAPI_PLUGIN -DENABLE_SAMPLE_PLUGINS -DENABLE_TEST_PLUGINS -DQT_CORE_LIB -DQT_DEPRECATED_WARNINGS -DQT_NO_DEBUG -DUSE_PREBUILT_QTWEBKIT_PACKAGE -Isrc/plugins/api/BioSignalMLAPI -I../src/plugins/api/BioSignalMLAPI -I../src/3rdparty/diff_match_patch/src -I../src/misc -I../src/plugins -I../src/plugins/miscellaneous/Core/src -I../src/3rdparty/QtSingleApplication/src -I../src/plugins/sample/Sample/src -Isrc/plugins/sample/Sample -I../src/plugins/sample/SampleTools/src -Isrc/plugins/sample/SampleTools -I../src/plugins/sample/SampleView/src -Isrc/plugins/sample/SampleView -I../src/plugins/sample/SampleWindow/src -Isrc/plugins/sample/SampleWindow -I../src/plugins/test/ZincWindow/src -Isrc/plugins/test/ZincWindow -I../src/plugins/api/BioSignalMLAPI/ext/include -I../src/plugins/api/BioSignalMLAPI/src -I../src/plugins/api/CellMLAPI/ext/include -I../src/plugins/api/CellMLAPI/src -Isrc/plugins/api/CellMLAPI -I../src/plugins/api/SBMLAPI/ext/include -I../src/plugins/api/SBMLAPI/src -Isrc/plugins/api/SBMLAPI -I../src/plugins/api/SEDMLAPI/ext/include -I../src/plugins/api/SEDMLAPI/src -Isrc/plugins/api/SEDMLAPI -I../src/plugins/dataStore/BioSignalMLDataStore/src -Isrc/plugins/dataStore/BioSignalMLDataStore -I../src/plugins/dataStore/CSVDataStore/src -Isrc/plugins/dataStore/CSVDataStore -I../src/plugins/dataStore/DataStore/src -Isrc/plugins/dataStore/DataStore -I../src/plugins/editing/CellMLAnnotationView/src -Isrc/plugins/editing/CellMLAnnotationView -I../src/plugins/editing/CellMLEditingView/src -Isrc/plugins/editing/CellMLEditingView -I../src/plugins/editing/CellMLTextView/src -Isrc/plugins/editing/CellMLTextView -I../src/plugins/editing/EditingView/src -Isrc/plugins/editing/EditingView -I../src/plugins/editing/RawCellMLView/src -Isrc/plugins/editing/RawCellMLView -I../src/plugins/editing/RawSEDMLView/src -Isrc/plugins/editing/RawSEDMLView -I../src/plugins/editing/RawTextView/src -Isrc/plugins/editing/RawTextView -I../src/plugins/editing/SEDMLEditingView/src -Isrc/plugins/editing/SEDMLEditingView -I../src/plugins/miscellaneous/Compiler/src -Isrc/plugins/miscellaneous/Compiler -Isrc/plugins/miscellaneous/Core -I../src/plugins/miscellaneous/HelpWindow/src -Isrc/plugins/miscellaneous/HelpWindow -I../src/plugins/miscellaneous/WebBrowserWindow/src -Isrc/plugins/miscellaneous/WebBrowserWindow -I../src/plugins/organisation/FileBrowserWindow/src -Isrc/plugins/organisation/FileBrowserWindow -I../src/plugins/organisation/FileOrganiserWindow/src -Isrc/plugins/organisation/FileOrganiserWindow -I../src/plugins/organisation/PMRWindow/src -Isrc/plugins/organisation/PMRWindow -I../src/plugins/organisation/PMRWorkspacesWindow/src -Isrc/plugins/organisation/PMRWorkspacesWindow -I../src/plugins/simulation/SimulationExperimentView/src -Isrc/plugins/simulation/SimulationExperimentView -I../src/plugins/solver/CVODESolver/src -Isrc/plugins/solver/CVODESolver -I../src/plugins/solver/ForwardEulerSolver/src -Isrc/plugins/solver/ForwardEulerSolver -I../src/plugins/solver/FourthOrderRungeKuttaSolver/src -Isrc/plugins/solver/FourthOrderRungeKuttaSolver -I../src/plugins/solver/HeunSolver/src -Isrc/plugins/solver/HeunSolver -I../src/plugins/solver/IDASolver/src -Isrc/plugins/solver/IDASolver -I../src/plugins/solver/KINSOLSolver/src -Isrc/plugins/solver/KINSOLSolver -I../src/plugins/solver/SecondOrderRungeKuttaSolver/src -Isrc/plugins/solver/SecondOrderRungeKuttaSolver -I../src/plugins/support/CellMLSupport/src -Isrc/plugins/support/CellMLSupport -I../src/plugins/support/COMBINESupport/src -Isrc/plugins/support/COMBINESupport -I../src/plugins/support/PMRSupport/src -Isrc/plugins/support/PMRSupport -I../src/plugins/support/QScintillaSupport/src -Isrc/plugins/support/QScintillaSupport -I../src/plugins/support/SEDMLSupport/src -Isrc/plugins/support/SEDMLSupport -I../src/plugins/support/StandardSupport/src -Isrc/plugins/support/StandardSupport -I../src/plugins/support/ZIPSupport/src -Isrc/plugins/support/ZIPSupport -I../src/plugins/thirdParty/libgit2/ext/include -I../src/plugins/thirdParty/libgit2/src -Isrc/plugins/thirdParty/libgit2 -I../src/plugins/thirdParty/LibXDiff/ext/include -I../src/plugins/thirdParty/LibXDiff/src -Isrc/plugins/thirdParty/LibXDiff -I../src/plugins/thirdParty/LLVMClang/ext/include -I../src/plugins/thirdParty/LLVMClang/src -Isrc/plugins/thirdParty/LLVMClang -I../src/plugins/thirdParty/OAuth/ext/include -I../src/plugins/thirdParty/OAuth/src -Isrc/plugins/thirdParty/OAuth -I../src/plugins/thirdParty/OpenSSL/ext/include -I../src/plugins/thirdParty/OpenSSL/src -Isrc/plugins/thirdParty/OpenSSL -I../src/plugins/thirdParty/QScintilla/ext/include -I../src/plugins/thirdParty/QScintilla/src -Isrc/plugins/thirdParty/QScintilla -I../src/plugins/thirdParty/Qwt/ext/include -I../src/plugins/thirdParty/Qwt/src -Isrc/plugins/thirdParty/Qwt -I../src/plugins/thirdParty/SUNDIALS/ext/include -I../src/plugins/thirdParty/SUNDIALS/src -Isrc/plugins/thirdParty/SUNDIALS -I../src/plugins/thirdParty/Zinc/ext/include -I../src/plugins/thirdParty/Zinc/src -Isrc/plugins/thirdParty/Zinc -I../src/plugins/thirdParty/zlib/ext/include -I../src/plugins/thirdParty/zlib/src -Isrc/plugins/thirdParty/zlib -I../src/plugins/tools/CellMLTools/src -Isrc/plugins/tools/CellMLTools -I../src/plugins/widget/EditorWidget/src -Isrc/plugins/widget/EditorWidget -I../src/plugins/widget/GraphPanelWidget/src -Isrc/plugins/widget/GraphPanelWidget -I../src/plugins/widget/MathMLViewerWidget/src -Isrc/plugins/widget/MathMLViewerWidget -I../src/plugins/widget/WebViewerWidget/src -Isrc/plugins/widget/WebViewerWidget -I../src/plugins/widget/ZincWidget/src -Isrc/plugins/widget/ZincWidget -isystem /opt/Qt/5.6/gcc_64/include -isystem /opt/Qt/5.6/gcc_64/include/QtCore -isystem /opt/Qt/5.6/gcc_64/./mkspecs/linux-g++ -Wall -W -Werror -std=c++11 -O3 -ffast-math -O3 -DNDEBUG -fPIC -fPIC -MMD -MT src/plugins/api/BioSignalMLAPI/CMakeFiles/BioSignalMLAPIPlugin.dir/src/moc_biosignalmlapiplugin.cpp.o -MF src/plugins/api/BioSignalMLAPI/CMakeFiles/BioSignalMLAPIPlugin.dir/src/moc_biosignalmlapiplugin.cpp.o.d -o src/plugins/api/BioSignalMLAPI/CMakeFiles/BioSignalMLAPIPlugin.dir/src/moc_biosignalmlapiplugin.cpp.o -c src/plugins/api/BioSignalMLAPI/src/moc_biosignalmlapiplugin.cpp
In file included from src/plugins/api/BioSignalMLAPI/src/moc_biosignalmlapiplugin.cpp:9:0:
src/plugins/api/BioSignalMLAPI/src/../../../../../../src/plugins/api/BioSignalMLAPI/src/biosignalmlapiplugin.h:55:2: error: #endif without #if
#endif
^
ninja: build stopped: subcommand failed.
Build step 'Execute shell' marked build as failure
Not sending mail to unregistered user noreply@github.com
Sending e-mails to: alan.garny@inria.fr
ERROR: Could not connect to SMTP host: localhost, port: 25
javax.mail.MessagingException: Could not connect to SMTP host: localhost, port: 25;
nested exception is:
java.net.ConnectException: Connection refused (Connection refused)
at com.sun.mail.smtp.SMTPTransport.openServer(SMTPTransport.java:1934)
at com.sun.mail.smtp.SMTPTransport.protocolConnect(SMTPTransport.java:638)
at javax.mail.Service.connect(Service.java:295)
at javax.mail.Service.connect(Service.java:176)
at javax.mail.Service.connect(Service.java:125)
at javax.mail.Transport.send0(Transport.java:194)
at javax.mail.Transport.send(Transport.java:124)
at hudson.tasks.MailSender.run(MailSender.java:131)
at hudson.tasks.Mailer.perform(Mailer.java:170)
at hudson.tasks.BuildStepCompatibilityLayer.perform(BuildStepCompatibilityLayer.java:81)
at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:20)
at hudson.model.AbstractBuild$AbstractBuildExecution.perform(AbstractBuild.java:730)
at hudson.model.AbstractBuild$AbstractBuildExecution.performAllBuildSteps(AbstractBuild.java:676)
at hudson.model.Build$BuildExecution.post2(Build.java:186)
at hudson.model.AbstractBuild$AbstractBuildExecution.post(AbstractBuild.java:621)
at hudson.model.Run.execute(Run.java:1760)
at hudson.matrix.MatrixRun.run(MatrixRun.java:146)
at hudson.model.ResourceController.execute(ResourceController.java:97)
at hudson.model.Executor.run(Executor.java:415)
Caused by: java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at com.sun.mail.util.SocketFetcher.createSocket(SocketFetcher.java:286)
at com.sun.mail.util.SocketFetcher.getSocket(SocketFetcher.java:231)
at com.sun.mail.smtp.SMTPTransport.openServer(SMTPTransport.java:1900)
... 18 more
[Set GitHub commit status (universal)] ERROR on repos [GHRepository@7a6ed18c[description=OpenCOR is a cross-platform modelling environment, which can be used to organise, edit, simulate and analyse CellML files.,homepage=http://www.opencor.ws/,name=opencor,license=<null>,fork=false,size=160375,milestones={},language=C++,commits={},source=<null>,parent=<null>,url=https://api.github.com/repos/opencor/opencor,id=9957667]] (sha:9534d38) with context:OpenCOR_Linux/Slave=Ubuntu_16.04_bioeng49
Setting commit status on GitHub for https://github.com/opencor/opencor/commit/9534d382e45e1b9f96c095c65e4ff30548628e9a
Finished: FAILURE
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