Started by upstream project "OpenCOR_Linux" build number 1069
originally caused by:
GitHub pull request #2374 of commit e22409987af5bb83081999f9cd24fa9ccca8845f, no merge conflicts.
Running as SYSTEM
Building remotely on Ubuntu_16.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/OpenCOR_Linux/Slave/Ubuntu_16.04_bioeng49
No credentials specified
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/opencor/opencor.git # timeout=10
Fetching upstream changes from https://github.com/opencor/opencor.git
> git --version # timeout=10
> git fetch --tags --progress -- https://github.com/opencor/opencor.git +refs/pull/*:refs/remotes/origin/pr/* # timeout=10
JENKINS-19022: warning: possible memory leak due to Git plugin usage; see: https://wiki.jenkins.io/display/JENKINS/Remove+Git+Plugin+BuildsByBranch+BuildData
Checking out Revision 490d0b251360871556fe1665b06c869aa7f62763 (refs/remotes/origin/pr/2374/merge)
> git config core.sparsecheckout # timeout=10
> git checkout -f 490d0b251360871556fe1665b06c869aa7f62763 # timeout=10
Commit message: "Merge e22409987af5bb83081999f9cd24fa9ccca8845f into 7035b6117c120b7135c1a9bb2ebf0f13dc3c8fac"
> git rev-list --no-walk 5e6c79ed32e52ae7092f20a3a77e394c6c7856c0 # timeout=10
[Ubuntu_16.04_bioeng49] $ /bin/sh -xe /tmp/jenkins14531390625767676783.sh
+ export PATH=/opt/Qt/5.12.9/gcc_64/bin:/opt/Qt/5.6/gcc_64/bin:/home/cmiss/localNode/node-v10.15.0-linux-x64/bin:/opt/Qt/5.6/gcc_64/bin:/home/cmiss/localNode/node-v10.15.0-linux-x64/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
+ ./clean
[44;37;1mCleaning OpenCOR...[0m
[42;37;1mAll done![0m
+ cd build
+ cmake -G Ninja -DCMAKE_BUILD_TYPE=Release -DENABLE_SAMPLE_PLUGINS=ON -DENABLE_TEST_PLUGINS=ON -DENABLE_TESTS=ON ..
-- The C compiler identification is GNU 8.4.0
-- The CXX compiler identification is GNU 8.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Building a release version of OpenCOR using Qt 5.12.9 LTS...
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCOR_Linux/Slave/Ubuntu_16.04_bioeng49/build
+ exitCode=0
+ [ 0 -ne 0 ]
+ ninja
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[385/1351] Building CXX object src/plugins/miscellaneous/Core/CMakeFiles/Core_mathmltests.dir/tests/mathmltests.cpp.o
FAILED: src/plugins/miscellaneous/Core/CMakeFiles/Core_mathmltests.dir/tests/mathmltests.cpp.o
/usr/local/bin/ccache /usr/bin/c++ -DCore_PLUGIN -DENABLE_SAMPLE_PLUGINS -DENABLE_TEST_PLUGINS -DQT_CORE_LIB -DQT_DEPRECATED_WARNINGS -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_TESTCASE_BUILDDIR=\"/home/cmiss/Jenkins/workspace/OpenCOR_Linux/Slave/Ubuntu_16.04_bioeng49/build\" -DQT_TESTLIB_LIB -DQT_WIDGETS_LIB -DQT_XMLPATTERNS_LIB -DQT_XML_LIB -DUNICODE -DUSE_PREBUILT_QTWEBKIT_PACKAGE -Isrc/plugins/miscellaneous/Core -I../src/plugins/miscellaneous/Core -Isrc/plugins/miscellaneous/Core/Core_mathmltests_autogen/include -I../src -I../src/3rdparty/diff_match_patch/src -I../src/misc -I../src/plugins -I../src/plugins/miscellaneous/Core/src -I../src/3rdparty/QtSingleApplication/src -I../ext/src/plugins/thirdParty/OpenSSL/./include -I../src/plugins/thirdParty/OpenSSL/src -I../ext/src/plugins/thirdParty/zlib/./include -I../src/plugins/thirdParty/zlib/src -I../ext/src/plugins/thirdParty/Python/./include -I../src/plugins/thirdParty/Python/src -I../ext/src/plugins/thirdParty/libSBML/./include -I../src/plugins/thirdParty/libSBML/src -I../ext/src/plugins/thirdParty/PythonPackages/./include -I../src/plugins/thirdParty/PythonPackages/src -I../ext/src/plugins/thirdParty/PythonQt/./include -I../src/plugins/thirdParty/PythonQt/src -I../src/plugins/dataStore/BioSignalMLDataStore/src -I../src/plugins/dataStore/CSVDataStore/src -I../src/plugins/dataStore/DataStore/src -I../src/plugins/editing/CellMLAnnotationView/src -I../src/plugins/editing/CellMLEditingView/src -I../src/plugins/editing/CellMLTextView/src -I../src/plugins/editing/EditingView/src -I../src/plugins/editing/RawCellMLView/src -I../src/plugins/editing/RawSEDMLView/src -I../src/plugins/editing/RawTextView/src -I../src/plugins/editing/SEDMLEditingView/src -I../src/plugins/miscellaneous/Compiler/src -I../src/plugins/miscellaneous/HelpWindow/src -I../src/plugins/miscellaneous/JupyterKernel/src -I../src/plugins/miscellaneous/PythonConsoleWindow/src -I../src/plugins/miscellaneous/PythonShell/src -I../src/plugins/miscellaneous/WebBrowserWindow/src -I../src/plugins/organisation/FileBrowserWindow/src -I../src/plugins/organisation/FileOrganiserWindow/src -I../src/plugins/organisation/PMRWindow/src -I../src/plugins/organisation/PMRWorkspacesWindow/src -I../src/plugins/simulation/SimulationExperimentView/src -I../src/plugins/solver/CVODESolver/src -I../src/plugins/solver/ForwardEulerSolver/src -I../src/plugins/solver/FourthOrderRungeKuttaSolver/src -I../src/plugins/solver/HeunSolver/src -I../src/plugins/solver/KINSOLSolver/src -I../src/plugins/solver/SecondOrderRungeKuttaSolver/src -I../src/plugins/support/CellMLSupport/src -I../src/plugins/support/COMBINESupport/src -I../src/plugins/support/PMRSupport/src -I../src/plugins/support/PythonQtSupport/src -I../src/plugins/support/PythonSupport/src -I../src/plugins/support/SEDMLSupport/src -I../src/plugins/support/SimulationSupport/src -I../src/plugins/support/StandardSupport/src -I../src/plugins/support/ZIPSupport/src -I../ext/src/plugins/thirdParty/CellMLAPI/./include -I../src/plugins/thirdParty/CellMLAPI/src -I../ext/src/plugins/thirdParty/libBioSignalML/./include -I../src/plugins/thirdParty/libBioSignalML/src -I../ext/src/plugins/thirdParty/libgit2/./include -I../src/plugins/thirdParty/libgit2/src -I../ext/src/plugins/thirdParty/libNuML/./include -I../src/plugins/thirdParty/libNuML/src -I../ext/src/plugins/thirdParty/libSEDML/./include -I../src/plugins/thirdParty/libSEDML/src -I../ext/src/plugins/thirdParty/LibXDiff/./include -I../src/plugins/thirdParty/LibXDiff/src -I../ext/src/plugins/thirdParty/LLVMClang/./include -I../src/plugins/thirdParty/LLVMClang/src -I../ext/src/plugins/thirdParty/OAuth/./include -I../src/plugins/thirdParty/OAuth/src -I../ext/src/plugins/thirdParty/QScintilla/./include -I../src/plugins/thirdParty/QScintilla/src -I../ext/src/plugins/thirdParty/Qwt/./include -I../src/plugins/thirdParty/Qwt/src -I../ext/src/plugins/thirdParty/SUNDIALS/./include -I../src/plugins/thirdParty/SUNDIALS/src -I../src/plugins/tools/CellMLTools/src -I../src/plugins/widget/EditorWidget/src -I../src/plugins/widget/GraphPanelWidget/src -I../src/plugins/widget/MathMLViewerWidget/src -I../src/plugins/widget/QScintillaWidget/src -I../src/plugins/widget/WebViewerWidget/src -I../src/plugins/sample/Sample/src -I../src/plugins/sample/SampleTools/src -I../src/plugins/sample/SampleView/src -I../src/plugins/sample/SampleWindow/src -I../src/plugins/test/ZincWindow/src -I../ext/src/plugins/thirdParty/Zinc/./include -I../src/plugins/thirdParty/Zinc/src -I../src/plugins/widget/ZincWidget/src -isystem /opt/Qt/5.12.9/gcc_64/include -isystem /opt/Qt/5.12.9/gcc_64/include/QtNetwork -isystem /opt/Qt/5.12.9/gcc_64/include/QtCore -isystem /opt/Qt/5.12.9/gcc_64/./mkspecs/linux-g++ -isystem /opt/Qt/5.12.9/gcc_64/include/QtWidgets -isystem /opt/Qt/5.12.9/gcc_64/include/QtGui -isystem /opt/Qt/5.12.9/gcc_64/include/QtXml -isystem /opt/Qt/5.12.9/gcc_64/include/QtXmlPatterns -isystem /opt/Qt/5.12.9/gcc_64/include/QtTest -Wall -W -Werror -no-pie -O3 -ffast-math -fPIC -std=gnu++14 -MD -MT src/plugins/miscellaneous/Core/CMakeFiles/Core_mathmltests.dir/tests/mathmltests.cpp.o -MF src/plugins/miscellaneous/Core/CMakeFiles/Core_mathmltests.dir/tests/mathmltests.cpp.o.d -o src/plugins/miscellaneous/Core/CMakeFiles/Core_mathmltests.dir/tests/mathmltests.cpp.o -c ../src/plugins/miscellaneous/Core/tests/mathmltests.cpp
../src/plugins/miscellaneous/Core/tests/mathmltests.cpp: In member function ‘void MathmlTests::tests(const QString&)’:
../src/plugins/miscellaneous/Core/tests/mathmltests.cpp:97:106: error: ‘focus’ was not declared in this scope
failMessage += QString("Failed to convert '%1/%2'\n%3\n%4\n%5").arg(pCategory, fileName, focus, actualOutput, expectedOutput);
^~~~~
[386/1351] Building CXX object src/plugins/miscellaneous/Core/CMakeFiles/Core_clitests.dir/src/windowwidget.cpp.o
[387/1351] Building CXX object src/plugins/miscellaneous/Core/CMakeFiles/Core_clitests.dir/src/xsltransformer.cpp.o
ninja: build stopped: subcommand failed.
Build step 'Execute shell' marked build as failure
[Set GitHub commit status (universal)] ERROR on repos [GHRepository@47a36761[nodeId=MDEwOlJlcG9zaXRvcnk5OTU3NjY3,description=OpenCOR is a cross-platform modelling environment, which can be used to organise, edit, simulate and analyse CellML files.,homepage=https://opencor.ws/,name=opencor,fork=false,archived=false,size=174597,milestones={},language=C++,commits={},source=<null>,parent=<null>,url=https://api.github.com/repos/opencor/opencor,id=9957667,nodeId=<null>,createdAt=2013-05-09T11:07:58Z,updatedAt=2020-07-04T23:54:45Z]] (sha:490d0b2) with context:OpenCOR_Linux/Slave=Ubuntu_16.04_bioeng49
Setting commit status on GitHub for https://github.com/opencor/opencor/commit/490d0b251360871556fe1665b06c869aa7f62763
Finished: FAILURE
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