Started by upstream project "OpenCMISS_GNULinux" build number 378
originally caused by:
Started by timer
Obtained pipeline-functionaltests-gnulinux.txt from git https://github.com/OpenCMISS/jenkins.git
Running in Durability level: MAX_SURVIVABILITY
Loading library opencmiss-library@master
02:12:24 GitHub API Usage: Current quota has 60 remaining (7 under budget). Next quota of 60 in 58 min
Examining opencmiss/jenkins-pipeline-library
Attempting to resolve master as a branch
Resolved master as branch master at revision 901cec77bae1509745ad4040093c0da6acfae806
No credentials specified
> git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/opencmiss/jenkins-pipeline-library.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/opencmiss/jenkins-pipeline-library.git
> git --version # timeout=10
> git fetch --no-tags --progress https://github.com/opencmiss/jenkins-pipeline-library.git +refs/heads/master:refs/remotes/origin/master # timeout=10
Checking out Revision 901cec77bae1509745ad4040093c0da6acfae806 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 901cec77bae1509745ad4040093c0da6acfae806 # timeout=10
Commit message: "Update cleanSetup.groovy"
[Pipeline] Start of Pipeline
[Pipeline] parallel
[Pipeline] { (Branch: Ubuntu 16.04)
[Pipeline] { (Branch: Ubuntu 14.04)
[Pipeline] node
[Pipeline] node
Running on Ubuntu_16.04_bioeng49 in /home/cmiss/Jenkins/workspace/OpenCMISS_FunctionalTests_GNULinux
[Pipeline] {
[Pipeline] ws
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux
[Pipeline] {
Running on 1034_Ubuntu in /home/opencmiss/Jenkins/workspace/OpenCMISS_FunctionalTests_GNULinux
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Prepare)
[Pipeline] ws
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux
[Pipeline] {
[Pipeline] sh
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Prepare)
[Pipeline] sh
+ mkdir -p opencmiss
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Clone)
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup
[Pipeline] {
[Pipeline] git
+ mkdir -p opencmiss
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Clone)
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup
[Pipeline] {
[Pipeline] git
No credentials specified
Fetching changes from the remote Git repository
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse --is-inside-work-tree # timeout=10
> git config remote.origin.url https://github.com/OpenCMISS/setup.git # timeout=10
Fetching upstream changes from https://github.com/OpenCMISS/setup.git
> git --version # timeout=10
> git fetch --tags --progress -- https://github.com/OpenCMISS/setup.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 48bfbafb36f141e1c835f8c769435e3243abc1d7 (refs/remotes/origin/develop)
Commit message: "Add OPENCMISS_PYTHON_EXECUTABLE to list of configurable options."
> git rev-parse --is-inside-work-tree # timeout=10
> git config remote.origin.url https://github.com/OpenCMISS/setup.git # timeout=10
Fetching upstream changes from https://github.com/OpenCMISS/setup.git
> git --version # timeout=10
> git fetch --tags --progress https://github.com/OpenCMISS/setup.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/develop^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/develop^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 48bfbafb36f141e1c835f8c769435e3243abc1d7 # timeout=10
> git branch -a -v --no-abbrev # timeout=10
> git branch -D develop # timeout=10
> git checkout -b develop 48bfbafb36f141e1c835f8c769435e3243abc1d7 # timeout=10
> git rev-list --no-walk 48bfbafb36f141e1c835f8c769435e3243abc1d7 # timeout=10
[Pipeline] }
[Pipeline] // dir
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework
[Pipeline] {
[Pipeline] git
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 48bfbafb36f141e1c835f8c769435e3243abc1d7 (refs/remotes/origin/develop)
Commit message: "Add OPENCMISS_PYTHON_EXECUTABLE to list of configurable options."
[Pipeline] }
[Pipeline] // dir
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework
[Pipeline] {
[Pipeline] git
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse refs/remotes/origin/develop^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/develop^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 48bfbafb36f141e1c835f8c769435e3243abc1d7 # timeout=10
> git branch -a -v --no-abbrev # timeout=10
> git branch -D develop # timeout=10
> git checkout -b develop 48bfbafb36f141e1c835f8c769435e3243abc1d7 # timeout=10
Checking out Revision 29857237945d5d1816d3762c176a7d774eeca70c (refs/remotes/origin/develop)
Commit message: "Added merging support for MacOS"
> git rev-parse --is-inside-work-tree # timeout=10
> git config remote.origin.url https://github.com/OpenCMISS/functional_test_framework.git # timeout=10
Fetching upstream changes from https://github.com/OpenCMISS/functional_test_framework.git
> git --version # timeout=10
> git fetch --tags --progress https://github.com/OpenCMISS/functional_test_framework.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/develop^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/develop^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 29857237945d5d1816d3762c176a7d774eeca70c # timeout=10
> git branch -a -v --no-abbrev # timeout=10
> git branch -D develop # timeout=10
> git checkout -b develop 29857237945d5d1816d3762c176a7d774eeca70c # timeout=10
> git rev-list --no-walk 29857237945d5d1816d3762c176a7d774eeca70c # timeout=10
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Configure Libraries)
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] {
[Pipeline] sh
+ cmake -DOPENCMISS_ROOT=../opencmiss -DOPENCMISS_LIBRARIES=iron -DOPENCMISS_CONFIG_BUILD_TYPE=Release ../setup
-- Checking CMake version..
-- Checking https CMAKE_3_14_5_HAS_HTTPS: YES
-- Using GitHub protocol: https://github.com/
-- Disabling download of cmake modules.
-- Disabling download of manage.
-- @
-- @@@@@@@@@@@@@@@@@@@@@@@@ SUMMARY @@@@@@@@@@@@@@@@@@@@@@@@
-- @
-- @ OPENCMISS_SETUP_TYPE: standard
-- @ OPENCMISS_INDEPENDENT: FALSE
-- @ OPENCMISS_PERFORM_INITIAL_BUILD: TRUE
-- @ OPENCMISS_VERSION: develop
-- @ OPENCMISS_MULTI_ARCHITECTURE: FALSE
-- @ OPENCMISS_CONFIG_BUILD_TYPE: Release
-- @
-- @ OPENCMISS_ROOT: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss
-- @ OPENCMISS_LIBRARIES: iron
-- @ OPENCMISS_PYTHON_EXECUTABLE:
-- @
-- @ OPENCMISS_CMAKE_MODULES_SOURCE_DIR: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/src/cmake_modules
-- @ OPENCMISS_CMAKE_MODULES_BINARY_DIR: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/build/cmake_modules/release
-- @ OPENCMISS_CMAKE_MODULE_PATH: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/install/share/cmake/Modules
-- @
-- @ MANAGE_CONFIGURE_ARGS: -DOPENCMISS_USE_ARCHITECTURE_PATH=FALSE;-DOPENCMISS_DEVELOP_ALL=YES;-DOPENCMISS_BUILD_TYPE=Release;-DOPENCMISS_IRON_ONLY=TRUE;-DOPENCMISS_PYTHON_EXECUTABLE=
-- @
-- @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
-- @
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Make Libraries)
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] {
[Pipeline] sh
> git rev-parse --is-inside-work-tree # timeout=10
> git config remote.origin.url https://github.com/OpenCMISS/functional_test_framework.git # timeout=10
Fetching upstream changes from https://github.com/OpenCMISS/functional_test_framework.git
> git --version # timeout=10
> git fetch --tags --progress -- https://github.com/OpenCMISS/functional_test_framework.git +refs/heads/*:refs/remotes/origin/* # timeout=10
+ make
[ 50%] Built target setup_cmake_modules
[100%] Built target setup_manage
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Configure Tests)
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] {
[Pipeline] sh
Checking out Revision 29857237945d5d1816d3762c176a7d774eeca70c (refs/remotes/origin/develop)
Commit message: "Added merging support for MacOS"
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Configure Libraries)
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] {
[Pipeline] sh
+ cmake -DOpenCMISSLibs_DIR=/home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/install -DTEST_DB_REPO_URL=https://github.com/OpenCMISS/functional_test_database -DTEST_DB_REPO_BRANCH=develop -DTEST_DB=test_db/tests -DOPENCMISS_CONFIG_BUILD_TYPE=Release ../test_framework
-- *** DB TAG: develop
+ cmake -DOPENCMISS_ROOT=../opencmiss -DOPENCMISS_LIBRARIES=iron -DOPENCMISS_CONFIG_BUILD_TYPE=Release ../setup
-- Checking CMake version..
-- Checking https CMAKE_3_14_4_HAS_HTTPS: YES
-- Using GitHub protocol: https://github.com/
-- Disabling download of cmake modules.
-- Disabling download of manage.
-- @
-- @@@@@@@@@@@@@@@@@@@@@@@@ SUMMARY @@@@@@@@@@@@@@@@@@@@@@@@
-- @
-- @ OPENCMISS_SETUP_TYPE: standard
-- @ OPENCMISS_INDEPENDENT: FALSE
-- @ OPENCMISS_PERFORM_INITIAL_BUILD: TRUE
-- @ OPENCMISS_VERSION: develop
-- @ OPENCMISS_MULTI_ARCHITECTURE: FALSE
-- @ OPENCMISS_CONFIG_BUILD_TYPE: Release
-- @
-- @ OPENCMISS_ROOT: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss
-- @ OPENCMISS_LIBRARIES: iron
-- @ OPENCMISS_PYTHON_EXECUTABLE:
-- @
-- @ OPENCMISS_CMAKE_MODULES_SOURCE_DIR: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/src/cmake_modules
-- @ OPENCMISS_CMAKE_MODULES_BINARY_DIR: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/build/cmake_modules/release
-- @ OPENCMISS_CMAKE_MODULE_PATH: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/opencmiss/install/share/cmake/Modules
-- @
-- @ MANAGE_CONFIGURE_ARGS: -DOPENCMISS_USE_ARCHITECTURE_PATH=FALSE;-DOPENCMISS_DEVELOP_ALL=YES;-DOPENCMISS_BUILD_TYPE=Release;-DOPENCMISS_IRON_ONLY=TRUE;-DOPENCMISS_PYTHON_EXECUTABLE=
-- @
-- @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
-- @
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Make Libraries)
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/setup-build
[Pipeline] {
[Pipeline] sh
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 14.04 Make Tests)
[Pipeline] dir
Running in /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] {
[Pipeline] sh
> git rev-parse refs/remotes/origin/develop^{commit} # timeout=10
> git rev-parse refs/remotes/origin/origin/develop^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 29857237945d5d1816d3762c176a7d774eeca70c # timeout=10
> git branch -a -v --no-abbrev # timeout=10
> git branch -D develop # timeout=10
> git checkout -b develop 29857237945d5d1816d3762c176a7d774eeca70c # timeout=10
+ make
[ 50%] Built target setup_cmake_modules
[100%] Built target setup_manage
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Configure Tests)
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] {
[Pipeline] sh
[ 6%] Performing update step for 'test_db'
-- *** DB TAG: develop
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Ubuntu 16.04 Make Tests)
[Pipeline] dir
Running in /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
[Pipeline] {
[Pipeline] sh
[ 6%] Performing update step for 'test_db'
Current branch develop is up to date.
[ 12%] No configure step for 'test_db'
[ 18%] No build step for 'test_db'
[ 25%] No install step for 'test_db'
[ 31%] Completed 'test_db'
[ 50%] Built target test_db
Current branch develop is up to date.
[ 12%] No configure step for 'test_db'
[ 18%] No build step for 'test_db'
[ 25%] No install step for 'test_db'
[ 31%] Completed 'test_db'
[ 50%] Built target test_db
[ 56%] Performing update step for 'ndiff'
Current branch v2.0.0 is up to date.
[ 62%] Performing configure step for 'ndiff'
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/ndiff/build
[ 68%] No build step for 'ndiff'
[ 75%] Performing install step for 'ndiff'
Scanning dependencies of target ndiff
[ 16%] Building C object CMakeFiles/ndiff.dir/ndiff.c.o
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testacquire-build
[ 1%] Performing update step for 'dof_constrants'
[ 33%] Building C object CMakeFiles/ndiff.dir/store.c.o
[ 50%] Building C object CMakeFiles/ndiff.dir/awklib.c.o
Current branch develop is up to date.
[ 2%] No configure step for 'dof_constrants'
[ 2%] No build step for 'dof_constrants'
[ 3%] No install step for 'dof_constrants'
[ 3%] Completed 'dof_constrants'
[ 4%] Built target dof_constrants
[ 5%] Performing update step for 'burgers_generalised'
[ 66%] Linking C executable ndiff
[100%] Built target ndiff
Install the project...
-- Install configuration: "Release"
-- Installing: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/ndiff/build/bin/ndiff
[ 81%] Completed 'ndiff'
[100%] Built target ndiff
Current branch develop is up to date.
[ 6%] No configure step for 'burgers_generalised'
[ 7%] No build step for 'burgers_generalised'
[ 7%] No install step for 'burgers_generalised'
[ 8%] Completed 'burgers_generalised'
[ 9%] Built target burgers_generalised
[ 9%] Performing update step for 'diffusion_equation'
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testacquire-build
[ 0%] Performing update step for 'stokes_dynamic'
Current branch develop is up to date.
[ 9%] No configure step for 'diffusion_equation'
[ 10%] No build step for 'diffusion_equation'
[ 10%] No install step for 'diffusion_equation'
[ 11%] Completed 'diffusion_equation'
[ 14%] Built target diffusion_equation
[ 14%] Performing update step for 'cellml_split_reaction_diffusion_equation'
Current branch develop is up to date.
[ 0%] No configure step for 'stokes_dynamic'
[ 1%] No build step for 'stokes_dynamic'
[ 2%] No install step for 'stokes_dynamic'
[ 3%] Completed 'stokes_dynamic'
[ 5%] Built target stokes_dynamic
[ 6%] Performing update step for 'static_advection_diffusion_equation'
Current branch develop is up to date.
[ 14%] No configure step for 'cellml_split_reaction_diffusion_equation'
[ 15%] No build step for 'cellml_split_reaction_diffusion_equation'
[ 15%] No install step for 'cellml_split_reaction_diffusion_equation'
[ 16%] Completed 'cellml_split_reaction_diffusion_equation'
[ 19%] Built target cellml_split_reaction_diffusion_equation
[ 20%] Performing update step for 'uniaxial_extension'
Current branch develop is up to date.
[ 7%] No configure step for 'static_advection_diffusion_equation'
[ 7%] No build step for 'static_advection_diffusion_equation'
[ 8%] No install step for 'static_advection_diffusion_equation'
[ 8%] Completed 'static_advection_diffusion_equation'
[ 9%] Built target static_advection_diffusion_equation
[ 9%] Performing update step for 'simple_shear'
Current branch develop is up to date.
Current branch develop is up to date.
[ 9%] No configure step for 'simple_shear'
[ 10%] No build step for 'simple_shear'
[ 21%] No configure step for 'uniaxial_extension'
[ 22%] No build step for 'uniaxial_extension'
[ 22%] No install step for 'uniaxial_extension'
[ 23%] Completed 'uniaxial_extension'
[ 24%] Built target uniaxial_extension
[ 25%] Performing update step for 'cantilever'
[ 10%] No install step for 'simple_shear'
[ 11%] Completed 'simple_shear'
[ 14%] Built target simple_shear
[ 14%] Performing update step for 'navierstokes_poiseuilleflow'
Current branch develop is up to date.
[ 14%] No configure step for 'navierstokes_poiseuilleflow'
[ 15%] No build step for 'navierstokes_poiseuilleflow'
[ 15%] No install step for 'navierstokes_poiseuilleflow'
[ 16%] Completed 'navierstokes_poiseuilleflow'
[ 19%] Built target navierstokes_poiseuilleflow
[ 20%] Performing update step for 'cantilever'
Current branch develop is up to date.
[ 25%] No configure step for 'cantilever'
[ 26%] No build step for 'cantilever'
[ 26%] No install step for 'cantilever'
[ 27%] Completed 'cantilever'
[ 29%] Built target cantilever
[ 30%] Performing update step for 'cantilever_growth'
Current branch develop is up to date.
[ 31%] No configure step for 'cantilever_growth'
[ 31%] No build step for 'cantilever_growth'
[ 32%] No install step for 'cantilever_growth'
[ 32%] Completed 'cantilever_growth'
[ 33%] Built target cantilever_growth
[ 33%] Performing update step for 'burgers_static'
Current branch develop is up to date.
[ 20%] No configure step for 'cantilever'
[ 21%] No build step for 'cantilever'
[ 21%] No install step for 'cantilever'
[ 22%] Completed 'cantilever'
[ 24%] Built target cantilever
[ 25%] Performing update step for 'burgers_generalised'
Current branch develop is up to date.
[ 34%] No configure step for 'burgers_static'
[ 34%] No build step for 'burgers_static'
[ 35%] No install step for 'burgers_static'
[ 35%] Completed 'burgers_static'
[ 37%] Built target burgers_static
[ 37%] Performing update step for 'hermite_prolate_spheroid_mechanics'
Current branch develop is up to date.
[ 26%] No configure step for 'burgers_generalised'
[ 27%] No build step for 'burgers_generalised'
[ 27%] No install step for 'burgers_generalised'
[ 28%] Completed 'burgers_generalised'
[ 29%] Built target burgers_generalised
[ 29%] Performing update step for 'burgers_dynamic'
Current branch develop is up to date.
[ 37%] No configure step for 'hermite_prolate_spheroid_mechanics'
[ 38%] No build step for 'hermite_prolate_spheroid_mechanics'
[ 39%] No install step for 'hermite_prolate_spheroid_mechanics'
[ 40%] Completed 'hermite_prolate_spheroid_mechanics'
[ 42%] Built target hermite_prolate_spheroid_mechanics
[ 42%] Performing update step for 'burgers_dynamic'
Current branch develop is up to date.
[ 29%] No configure step for 'burgers_dynamic'
[ 30%] No build step for 'burgers_dynamic'
[ 31%] No install step for 'burgers_dynamic'
[ 31%] Completed 'burgers_dynamic'
[ 33%] Built target burgers_dynamic
[ 33%] Performing update step for 'cellml_split_reaction_diffusion_equation'
Current branch develop is up to date.
[ 42%] No configure step for 'burgers_dynamic'
[ 43%] No build step for 'burgers_dynamic'
[ 44%] No install step for 'burgers_dynamic'
[ 44%] Completed 'burgers_dynamic'
[ 46%] Built target burgers_dynamic
[ 46%] Performing update step for 'left_ventricle_inflation'
Current branch develop is up to date.
[ 33%] No configure step for 'cellml_split_reaction_diffusion_equation'
[ 34%] No build step for 'cellml_split_reaction_diffusion_equation'
[ 34%] No install step for 'cellml_split_reaction_diffusion_equation'
[ 35%] Completed 'cellml_split_reaction_diffusion_equation'
[ 38%] Built target cellml_split_reaction_diffusion_equation
[ 39%] Performing update step for 'cantilever_growth'
Current branch develop is up to date.
[ 46%] No configure step for 'left_ventricle_inflation'
[ 47%] No build step for 'left_ventricle_inflation'
[ 48%] No install step for 'left_ventricle_inflation'
[ 48%] Completed 'left_ventricle_inflation'
[ 50%] Built target left_ventricle_inflation
[ 50%] Performing update step for 'membrane_extension_2d_space'
Current branch develop is up to date.
[ 40%] No configure step for 'cantilever_growth'
[ 40%] No build step for 'cantilever_growth'
[ 41%] No install step for 'cantilever_growth'
[ 41%] Completed 'cantilever_growth'
[ 42%] Built target cantilever_growth
[ 43%] Performing update step for 'dof_constrants'
Current branch develop is up to date.
[ 44%] No configure step for 'dof_constrants'
[ 44%] No build step for 'dof_constrants'
[ 45%] No install step for 'dof_constrants'
[ 45%] Completed 'dof_constrants'
[ 46%] Built target dof_constrants
[ 46%] Performing update step for 'burgers_static'
Current branch develop is up to date.
[ 51%] No configure step for 'membrane_extension_2d_space'
[ 51%] No build step for 'membrane_extension_2d_space'
[ 52%] No install step for 'membrane_extension_2d_space'
[ 52%] Completed 'membrane_extension_2d_space'
[ 54%] Built target membrane_extension_2d_space
[ 55%] Performing update step for 'monodomain_2D_HH'
Current branch develop is up to date.
[ 47%] No configure step for 'burgers_static'
[ 47%] No build step for 'burgers_static'
[ 48%] No install step for 'burgers_static'
[ 48%] Completed 'burgers_static'
[ 50%] Built target burgers_static
[ 50%] Performing update step for 'left_ventricle_inflation'
Current branch develop is up to date.
[ 55%] No configure step for 'monodomain_2D_HH'
[ 56%] No build step for 'monodomain_2D_HH'
[ 56%] No install step for 'monodomain_2D_HH'
[ 57%] Completed 'monodomain_2D_HH'
[ 59%] Built target monodomain_2D_HH
[ 60%] Performing update step for 'darcy_static'
Current branch develop is up to date.
[ 50%] No configure step for 'left_ventricle_inflation'
[ 51%] No build step for 'left_ventricle_inflation'
[ 52%] No install step for 'left_ventricle_inflation'
[ 52%] Completed 'left_ventricle_inflation'
[ 54%] Built target left_ventricle_inflation
[ 55%] Performing update step for 'uniaxial_extension'
Current branch develop is up to date.
[ 61%] No configure step for 'darcy_static'
[ 61%] No build step for 'darcy_static'
[ 62%] No install step for 'darcy_static'
[ 62%] Completed 'darcy_static'
[ 63%] Built target darcy_static
[ 63%] Performing update step for 'stokes_dynamic'
Current branch develop is up to date.
[ 56%] No configure step for 'uniaxial_extension'
[ 57%] No build step for 'uniaxial_extension'
[ 57%] No install step for 'uniaxial_extension'
[ 58%] Completed 'uniaxial_extension'
[ 59%] Built target uniaxial_extension
[ 59%] Performing update step for 'diffusion_equation'
Current branch develop is up to date.
[ 63%] No configure step for 'stokes_dynamic'
[ 64%] No build step for 'stokes_dynamic'
[ 65%] No install step for 'stokes_dynamic'
[ 66%] Completed 'stokes_dynamic'
[ 68%] Built target stokes_dynamic
[ 69%] Performing update step for 'linear_tet_mechanics'
Current branch develop is up to date.
[ 59%] No configure step for 'diffusion_equation'
[ 60%] No build step for 'diffusion_equation'
[ 60%] No install step for 'diffusion_equation'
[ 61%] Completed 'diffusion_equation'
[ 64%] Built target diffusion_equation
[ 64%] Performing update step for 'hermite_prolate_spheroid_mechanics'
Current branch develop is up to date.
[ 70%] No configure step for 'linear_tet_mechanics'
[ 71%] No build step for 'linear_tet_mechanics'
[ 71%] No install step for 'linear_tet_mechanics'
[ 72%] Completed 'linear_tet_mechanics'
[ 73%] Built target linear_tet_mechanics
[ 74%] Performing update step for 'mooney_rivlin_cellml'
Current branch develop is up to date.
[ 64%] No configure step for 'hermite_prolate_spheroid_mechanics'
[ 65%] No build step for 'hermite_prolate_spheroid_mechanics'
[ 66%] No install step for 'hermite_prolate_spheroid_mechanics'
[ 67%] Completed 'hermite_prolate_spheroid_mechanics'
[ 69%] Built target hermite_prolate_spheroid_mechanics
[ 70%] Performing update step for 'homogeneous_pipe_axial_extension'
Current branch develop is up to date.
[ 75%] No configure step for 'mooney_rivlin_cellml'
[ 75%] No build step for 'mooney_rivlin_cellml'
[ 76%] No install step for 'mooney_rivlin_cellml'
[ 76%] Completed 'mooney_rivlin_cellml'
[ 77%] Built target mooney_rivlin_cellml
[ 78%] Performing update step for 'homogeneous_pipe_axial_extension'
Current branch develop is up to date.
[ 71%] No configure step for 'homogeneous_pipe_axial_extension'
[ 72%] No build step for 'homogeneous_pipe_axial_extension'
[ 72%] No install step for 'homogeneous_pipe_axial_extension'
[ 73%] Completed 'homogeneous_pipe_axial_extension'
[ 74%] Built target homogeneous_pipe_axial_extension
[ 74%] Performing update step for 'membrane_extension_2d_space'
Current branch develop is up to date.
[ 79%] No configure step for 'homogeneous_pipe_axial_extension'
[ 80%] No build step for 'homogeneous_pipe_axial_extension'
[ 80%] No install step for 'homogeneous_pipe_axial_extension'
[ 81%] Completed 'homogeneous_pipe_axial_extension'
[ 82%] Built target homogeneous_pipe_axial_extension
Current branch develop is up to date.
[ 75%] No configure step for 'membrane_extension_2d_space'
[ 82%] Performing update step for 'navierstokes_poiseuilleflow'
[ 75%] No build step for 'membrane_extension_2d_space'
[ 76%] No install step for 'membrane_extension_2d_space'
[ 76%] Completed 'membrane_extension_2d_space'
[ 78%] Built target membrane_extension_2d_space
[ 79%] Performing update step for 'linear_tet_mechanics'
Current branch develop is up to date.
[ 82%] No configure step for 'navierstokes_poiseuilleflow'
[ 83%] No build step for 'navierstokes_poiseuilleflow'
[ 83%] No install step for 'navierstokes_poiseuilleflow'
[ 84%] Completed 'navierstokes_poiseuilleflow'
[ 87%] Built target navierstokes_poiseuilleflow
[ 88%] Performing update step for 'nonlinear_poisson_equation'
Current branch develop is up to date.
[ 80%] No configure step for 'linear_tet_mechanics'
[ 81%] No build step for 'linear_tet_mechanics'
[ 81%] No install step for 'linear_tet_mechanics'
[ 82%] Completed 'linear_tet_mechanics'
[ 83%] Built target linear_tet_mechanics
[ 84%] Performing update step for 'darcy_static'
Current branch develop is up to date.
[ 85%] No configure step for 'darcy_static'
[ 85%] No build step for 'darcy_static'
Current branch develop is up to date.
[ 89%] No configure step for 'nonlinear_poisson_equation'
[ 89%] No build step for 'nonlinear_poisson_equation'
[ 90%] No install step for 'nonlinear_poisson_equation'
[ 90%] Completed 'nonlinear_poisson_equation'
[ 91%] Built target nonlinear_poisson_equation
[ 91%] Performing update step for 'simple_shear'
[ 86%] No install step for 'darcy_static'
[ 86%] Completed 'darcy_static'
[ 87%] Built target darcy_static
[ 88%] Performing update step for 'monodomain_2D_HH'
Current branch develop is up to date.
[ 88%] No configure step for 'monodomain_2D_HH'
[ 89%] No build step for 'monodomain_2D_HH'
[ 89%] No install step for 'monodomain_2D_HH'
[ 90%] Completed 'monodomain_2D_HH'
[ 92%] Built target monodomain_2D_HH
[ 93%] Performing update step for 'nonlinear_poisson_equation'
Current branch develop is up to date.
[ 91%] No configure step for 'simple_shear'
[ 92%] No build step for 'simple_shear'
[ 92%] No install step for 'simple_shear'
[ 93%] Completed 'simple_shear'
[ 96%] Built target simple_shear
[ 97%] Performing update step for 'static_advection_diffusion_equation'
Current branch develop is up to date.
[ 94%] No configure step for 'nonlinear_poisson_equation'
[ 94%] No build step for 'nonlinear_poisson_equation'
[ 95%] No install step for 'nonlinear_poisson_equation'
[ 95%] Completed 'nonlinear_poisson_equation'
[ 96%] Built target nonlinear_poisson_equation
[ 97%] Performing update step for 'mooney_rivlin_cellml'
Current branch develop is up to date.
[ 98%] No configure step for 'static_advection_diffusion_equation'
[ 98%] No build step for 'static_advection_diffusion_equation'
[ 99%] No install step for 'static_advection_diffusion_equation'
[ 99%] Completed 'static_advection_diffusion_equation'
[100%] Built target static_advection_diffusion_equation
[ 50%] Built target acquire_tests
[ 56%] Performing update step for 'ndiff'
Current branch develop is up to date.
[ 98%] No configure step for 'mooney_rivlin_cellml'
[ 98%] No build step for 'mooney_rivlin_cellml'
[ 99%] No install step for 'mooney_rivlin_cellml'
[ 99%] Completed 'mooney_rivlin_cellml'
[100%] Built target mooney_rivlin_cellml
[100%] Built target acquire_tests
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testsetup-build
[100%] Built target setup_tests
-- Looking for an MPI ...
Current branch v2.0.0 is up to date.
[ 62%] Performing configure step for 'ndiff'
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/ndiff/build
[ 68%] No build step for 'ndiff'
[ 75%] Performing install step for 'ndiff'
Scanning dependencies of target ndiff
[ 16%] Building C object CMakeFiles/ndiff.dir/ndiff.c.o
[ 33%] Building C object CMakeFiles/ndiff.dir/store.c.o
[ 50%] Building C object CMakeFiles/ndiff.dir/awklib.c.o
[ 66%] Linking C executable ndiff
[100%] Built target ndiff
Install the project...
-- Install configuration: "Release"
-- Installing: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/ndiff/build/bin/ndiff
[ 81%] Completed 'ndiff'
[100%] Built target ndiff
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testsetup-build
-- Checking method: F77_HEADER
-- Checking method: F08_MODULE
-- Checking method: F90_MODULE
[100%] Built target setup_tests
-- Looking for an MPI ...
-- Checking method: F77_HEADER
-- Checking method: F08_MODULE
-- Checking method: F90_MODULE
-- Looking for an MPI ... found mpich
-- Toolchain: Instrumentation:
-- Looking for OpenCMISS-Iron ...
-- Looking for OpenCMISS-Iron ... Success
-- Looking for OpenCMISS-Zinc ...
-- Looking for OpenCMISS-Zinc ... Not found
-- Configuring done
-- Generating done
-- Build files have been written to: /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testrunner-build
[ 6%] Built target burgers_dynamic_fortran
[ 13%] Built target burgers_generalised_fortran
[ 20%] Built target burgers_static_fortran
[ 26%] Built target cantilever
[ 33%] Built target cellml_split_reaction_diffusion_equation
[ 40%] Built target darcy_static_fortran
[ 46%] Built target diffusion_equation
[ 53%] Built target linear_tet_mechanics
[ 60%] Built target membrane_extension_2d_space
[ 66%] Built target mooney_rivlin_cellml
[ 73%] Built target nonlinear_poisson_equation
[ 80%] Built target simple_shear
[ 86%] Built target static_advection_diffusion_equation
[ 93%] Built target stokes_dynamic_fortran
[100%] Built target uniaxial_extension
[100%] Built target build_tests
Test project /home/cmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
Start 1: burgers_dynamic
-- Checking method: F77_HEADER
-- Checking method: F08_MODULE
-- Checking method: F90_MODULE
-- Checking method: F77_HEADER
-- Checking method: F08_MODULE
-- Checking method: F90_MODULE
-- Looking for an MPI ... found mpich
-- Toolchain: Instrumentation:
-- Looking for OpenCMISS-Iron ...
-- Looking for OpenCMISS-Iron ... Success
-- Looking for OpenCMISS-Zinc ...
-- Looking for OpenCMISS-Zinc ... Not found
-- Configuring done
-- Generating done
-- Build files have been written to: /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build/testrunner-build
[ 6%] Built target burgers_dynamic_fortran
[ 13%] Built target burgers_generalised_fortran
[ 20%] Built target burgers_static_fortran
[ 26%] Built target cantilever
[ 33%] Built target cellml_split_reaction_diffusion_equation
[ 40%] Built target darcy_static_fortran
1/23 Test #1: burgers_dynamic ............................ Passed 1.00 sec
Start 2: burgers_generalised
[ 46%] Built target diffusion_equation
[ 53%] Built target linear_tet_mechanics
[ 60%] Built target membrane_extension_2d_space
[ 66%] Built target mooney_rivlin_cellml
[ 73%] Built target nonlinear_poisson_equation
[ 80%] Built target simple_shear
[ 86%] Built target static_advection_diffusion_equation
[ 93%] Built target stokes_dynamic_fortran
[100%] Built target uniaxial_extension
[100%] Built target build_tests
Test project /home/opencmiss/Jenkins/workspace/OpenCMISS_GNULinux/test_framework-build
Start 1: burgers_dynamic
2/23 Test #2: burgers_generalised ........................ Passed 0.10 sec
Start 3: burgers_static
3/23 Test #3: burgers_static ............................. Passed 0.14 sec
Start 4: cantilever
1/23 Test #1: burgers_dynamic ............................ Passed 0.14 sec
Start 2: burgers_generalised
2/23 Test #2: burgers_generalised ........................ Passed 0.12 sec
Start 3: burgers_static
3/23 Test #3: burgers_static ............................. Passed 0.08 sec
Start 4: cantilever
4/23 Test #4: cantilever ................................. Passed 0.83 sec
Start 5: pycantilever_growth
4/23 Test #4: cantilever ................................. Passed 0.74 sec
Start 5: pycantilever_growth
5/23 Test #5: pycantilever_growth ........................ Passed 4.99 sec
Start 6: cellml_split_reaction_diffusion_equation
6/23 Test #6: cellml_split_reaction_diffusion_equation ... Passed 2.03 sec
Start 7: darcy_static
7/23 Test #7: darcy_static ............................... Passed 0.10 sec
Start 8: diffusion_equation
8/23 Test #8: diffusion_equation ......................... Passed 0.70 sec
Start 9: pydof_constrants
5/23 Test #5: pycantilever_growth ........................ Passed 7.25 sec
Start 6: cellml_split_reaction_diffusion_equation
9/23 Test #9: pydof_constrants ........................... Passed 0.52 sec
Start 10: pyhermite_prolate_spheroid_mechanics
6/23 Test #6: cellml_split_reaction_diffusion_equation ... Passed 2.50 sec
Start 7: darcy_static
7/23 Test #7: darcy_static ............................... Passed 0.15 sec
Start 8: diffusion_equation
8/23 Test #8: diffusion_equation ......................... Passed 0.74 sec
Start 9: pydof_constrants
9/23 Test #9: pydof_constrants ........................... Passed 0.72 sec
Start 10: pyhermite_prolate_spheroid_mechanics
10/23 Test #10: pyhermite_prolate_spheroid_mechanics ....... Passed 12.17 sec
Start 11: pyhomogeneous_pipe_axial_extension
10/23 Test #10: pyhermite_prolate_spheroid_mechanics ....... Passed 12.89 sec
Start 11: pyhomogeneous_pipe_axial_extension
11/23 Test #11: pyhomogeneous_pipe_axial_extension ......... Passed 39.14 sec
Start 12: pyleft_ventricle_inflation
11/23 Test #11: pyhomogeneous_pipe_axial_extension ......... Passed 41.78 sec
Start 12: pyleft_ventricle_inflation
12/23 Test #12: pyleft_ventricle_inflation ................. Passed 19.67 sec
Start 13: linear_tet_mechanics
13/23 Test #13: linear_tet_mechanics ....................... Passed 0.03 sec
Start 14: membrane_extension_2d_space
14/23 Test #14: membrane_extension_2d_space ................ Passed 0.03 sec
Start 15: pymonodomain_2D_HH
12/23 Test #12: pyleft_ventricle_inflation ................. Passed 21.26 sec
Start 13: linear_tet_mechanics
13/23 Test #13: linear_tet_mechanics ....................... Passed 0.05 sec
Start 14: membrane_extension_2d_space
14/23 Test #14: membrane_extension_2d_space ................ Passed 0.04 sec
Start 15: pymonodomain_2D_HH
15/23 Test #15: pymonodomain_2D_HH ......................... Passed 13.56 sec
Start 16: mooney_rivlin_cellml
16/23 Test #16: mooney_rivlin_cellml ....................... Passed 0.15 sec
Start 17: pynavierstokes_poiseuilleflow
15/23 Test #15: pymonodomain_2D_HH ......................... Passed 13.67 sec
Start 16: mooney_rivlin_cellml
16/23 Test #16: mooney_rivlin_cellml ....................... Passed 0.17 sec
Start 17: pynavierstokes_poiseuilleflow
17/23 Test #17: pynavierstokes_poiseuilleflow .............. Passed 55.57 sec
Start 18: nonlinear_poisson_equation
18/23 Test #18: nonlinear_poisson_equation ................. Passed 0.04 sec
Start 19: simple_shear
19/23 Test #19: simple_shear ............................... Passed 2.35 sec
Start 20: static_advection_diffusion_equation
20/23 Test #20: static_advection_diffusion_equation ........ Passed 6.56 sec
Start 21: stokes_dynamic
21/23 Test #21: stokes_dynamic ............................. Passed 0.11 sec
Start 22: uniaxial_extension
22/23 Test #22: uniaxial_extension ......................... Passed 0.08 sec
Start 23: pyuniaxial_extension
23/23 Test #23: pyuniaxial_extension ....................... Passed 0.17 sec
100% tests passed, 0 tests failed out of 23
Total Test time (real) = 159.08 sec
[100%] Built target run_tests
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // ws
[Pipeline] }
[Pipeline] // node
[Pipeline] }
17/23 Test #17: pynavierstokes_poiseuilleflow .............. Passed 64.25 sec
Start 18: nonlinear_poisson_equation
18/23 Test #18: nonlinear_poisson_equation ................. Passed 0.09 sec
Start 19: simple_shear
19/23 Test #19: simple_shear ............................... Passed 2.65 sec
Start 20: static_advection_diffusion_equation
20/23 Test #20: static_advection_diffusion_equation ........ Passed 7.65 sec
Start 21: stokes_dynamic
21/23 Test #21: stokes_dynamic ............................. Passed 0.18 sec
Start 22: uniaxial_extension
22/23 Test #22: uniaxial_extension ......................... Passed 0.16 sec
Start 23: pyuniaxial_extension
23/23 Test #23: pyuniaxial_extension ....................... Passed 0.49 sec
100% tests passed, 0 tests failed out of 23
Total Test time (real) = 178.78 sec
[100%] Built target run_tests
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // ws
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // parallel
[Pipeline] End of Pipeline
Finished: SUCCESS
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