Changes

Summary

  1. CMake: USE_PREBUILT_MESA_PACKAGE should only be available on Linux. (commit: c9ae355) (details)
  2. cmake/patchcmake.c: make sure it builds fine using GCC/G++ 5.x (#1391). (commit: 5a57f41) (details)
  3. Updated our Mesa package (#1391). (commit: 2d747ba) (details)
  4. Slight update to our QtWebKit readme file (#1391). (commit: 93af7a8) (details)
  5. Updated our QtWebKit package (#1391). (commit: ecda324) (details)
  6. Updated our CellML API package (#1391). (commit: f250a9f) (details)
  7. Updated our SBML API package (#1391). (commit: 23ebd4b) (details)
  8. Updated our SED-ML API package (#1391). (commit: 194aa77) (details)
  9. Temporarily disable BioSignalML-related plugins (#1391). (commit: 7ff0ff0) (details)
  10. Updated our libigt2 package (#1391). (commit: e4ca80b) (details)
  11. Updated our LibXDiff and OAuth packages (#1391). (commit: 4225d71) (details)
  12. Updated our OpenSSL package (#1391). (commit: e2f1d3a) (details)
  13. Updated our SUNDIALS and zlib packages (#1391). (commit: cde844e) (details)
  14. Updated our QScintilla and Qwt packages (#1391). (commit: c9ae45e) (details)
  15. Updated our Zinc package (#1391). (commit: 00d64b9) (details)
  16. Updated our LLVM+Clang package (#1391). (commit: 9cc1901) (details)
  17. Linux: rebuild BioSignalML libraries for GCC 5.5 (#1391). (commit: 27cddfe) (details)
  18. QtWebKit package: make sure that our generated CMake files are properly (commit: 4d824de) (details)
  19. Linux: rebuild BioSignalML libraries for GCC 5.4 (#1391) (commit: e079865) (details)
  20. Updated our QtWebKit package (#1391). (commit: d623ac9) (details)
  21. Some minor cleaning up (#1391) [ci skip]. (commit: 8e2e923) (details)
  22. Zinc package: slight update to our tests until we formally upgrade to (commit: 0a3a16d) (details)
  23. Travis CI: check whether there is an Ubuntu 16.04 LTS machine that we (commit: dbf0b5a) (details)
  24. Updated our SBML and SED-ML API packages (#1391). (commit: d3ba50f) (details)
  25. Travis CI: well, no Ubuntu 16.04 LTS available, so reverting to Ubuntu (commit: 87eb138) (details)
  26. Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=0 makes any (commit: 6d82c51) (details)
  27. Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=0 makes any (commit: abacefc) (details)
  28. Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=1 makes any (commit: 894b963) (details)
  29. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 4fd0019) (details)
  30. Reverted part of commit abacefc (oops!) (#1391) [ci skip]. (commit: 557325c) (details)
  31. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: b1a9ba3) (details)
  32. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: ce24071) (details)
  33. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: a10306d) (details)
  34. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 675bbf6) (details)
  35. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 942c13e) (details)
  36. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: d098a5d) (details)
  37. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 5c9d6c0) (details)
  38. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: fcbdbac) (details)
  39. Some minor cleaning up. (commit: 7e88595) (details)
  40. Plugin tests: make sure that their external dependencies are set in the (commit: 0d5c089) (details)
  41. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: c3a3853) (details)
  42. Trying to remove some RPath information on Linux (#1391). (commit: 8933481) (details)
  43. Trying to remove some RPath information on Linux (#1391). (commit: eb6b618) (details)
  44. Trying to remove some RPath information on Linux (#1391). (commit: d1c4545) (details)
  45. Ok, removing some RPath information on Linux wasn't a good idea! (#1391) (commit: bc2d8ed) (details)
  46. Some minor cleaning up [ci skip]. (commit: 0d46c88) (details)
  47. Travis CI: trying not to use GCC/G++ 5.x (#1391). (commit: 95f67df) (details)
  48. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: a7f7919) (details)
  49. Travis CI: trying not to use GCC/G++ 5.x (#1391). (commit: 6254f34) (details)
  50. Travis CI: trying not to use GCC/G++ 5.x (#1391). (commit: dabe8ab) (details)
  51. Travis CI: trying not to use GCC/G++ 5.x (#1391). (commit: 6ee0d34) (details)
  52. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 227480c) (details)
  53. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 57b0001) (details)
  54. Some minor cleaning up. (commit: 4b7fb76) (details)
  55. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 33e11e1) (details)
  56. Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391). (commit: 8f746aa) (details)
  57. Some minor cleaning up [ci skip]. (commit: 32e5067) (details)
  58. Travis CI: temporarily (hopefully) disable building and running our (commit: ec7d4e6) (details)
  59. Travis CI: temporarily (hopefully) disable building and running our (commit: 70e2894) (details)
Commit c9ae35549edee92a3de856865b62a03d9d7d6bc7 by Alan Garny
CMake: USE_PREBUILT_MESA_PACKAGE should only be available on Linux.
(commit: c9ae355)
The file was modified CMakeLists.txt (diff)
Commit 5a57f416be82b7d84fefefde4811303b2e0fc734 by Alan Garny
cmake/patchcmake.c: make sure it builds fine using GCC/G++ 5.x (#1391).
(commit: 5a57f41)
The file was modified cmake/patchcmake.c (diff)
Commit 2d747ba0c7c97d329ade10f17622d6d1f8dc0547 by Alan Garny
Updated our Mesa package (#1391).
(commit: 2d747ba)
The file was modified distrib/mesa/CMakeLists.txt (diff)
Commit 93af7a81363d18944c834d9b5e7d44800e4d381e by Alan Garny
Slight update to our QtWebKit readme file (#1391).
(commit: 93af7a8)
The file was modified src/3rdparty/QtWebKit/README.rst (diff)
Commit ecda324f7020ca18fc60d211ad2610242a7f6c15 by Alan Garny
Updated our QtWebKit package (#1391).
(commit: ecda324)
The file was modified src/3rdparty/QtWebKit/CMakeLists.txt (diff)
Commit f250a9f978b932de4b28b55491a9fffcaf155fcb by Alan Garny
Updated our CellML API package (#1391).
(commit: f250a9f)
The file was modified src/plugins/api/CellMLAPI/CMakeLists.txt (diff)
Commit 23ebd4b1f35e4114708f4937aa5f8c1ba8a87b87 by Alan Garny
Updated our SBML API package (#1391).
(commit: 23ebd4b)
The file was modified src/plugins/api/SBMLAPI/CMakeLists.txt (diff)
Commit 194aa77968cc2ff21d2b3b9cdffb6ab56c76566f by Alan Garny
Updated our SED-ML API package (#1391).
(commit: 194aa77)
The file was modified src/plugins/api/SEDMLAPI/CMakeLists.txt (diff)
Commit 7ff0ff0a775d01d4a4febb9851a45f020976590f by Alan Garny
Temporarily disable BioSignalML-related plugins (#1391).
(commit: 7ff0ff0)
The file was modified CMakeLists.txt (diff)
Commit e4ca80b4d6008709b1eb789602bf7e10da507c27 by Alan Garny
Updated our libigt2 package (#1391).
(commit: e4ca80b)
The file was modified src/plugins/thirdParty/libgit2/CMakeLists.txt (diff)
Commit 4225d712117a0c099574fd8c74e1b4624d704709 by Alan Garny
Updated our LibXDiff and OAuth packages (#1391).
(commit: 4225d71)
The file was modified src/plugins/thirdParty/LibXDiff/CMakeLists.txt (diff)
The file was modified src/plugins/thirdParty/OAuth/CMakeLists.txt (diff)
Commit e2f1d3a3adf55d01e4decb8e84bd4ff26b68ff34 by Alan Garny
Updated our OpenSSL package (#1391).
(commit: e2f1d3a)
The file was modified src/plugins/thirdParty/OpenSSL/CMakeLists.txt (diff)
Commit cde844ee6d4da819265da5995f4f8a1ad54af9ac by Alan Garny
Updated our SUNDIALS and zlib packages (#1391).
(commit: cde844e)
The file was modified src/plugins/thirdParty/SUNDIALS/CMakeLists.txt (diff)
The file was modified src/plugins/thirdParty/zlib/CMakeLists.txt (diff)
Commit c9ae45eb7a4f0d24cf36509b659977e8232e673e by Alan Garny
Updated our QScintilla and Qwt packages (#1391).
(commit: c9ae45e)
The file was modified src/plugins/thirdParty/Qwt/CMakeLists.txt (diff)
The file was modified src/plugins/thirdParty/QScintilla/CMakeLists.txt (diff)
Commit 00d64b9f3aed180c23a50b03dbb31a57267f3787 by Alan Garny
Updated our Zinc package (#1391).
(commit: 00d64b9)
The file was modified src/plugins/thirdParty/Zinc/CMakeLists.txt (diff)
Commit 9cc1901510221d81433aae32faeea9ec872d5ba7 by Alan Garny
Updated our LLVM+Clang package (#1391).
(commit: 9cc1901)
The file was modified src/plugins/thirdParty/LLVMClang/CMakeLists.txt (diff)
Commit 27cddfef5fe7dc5dabc68845c067c8b428c06add by dave
Linux: rebuild BioSignalML libraries for GCC 5.5 (#1391).
(commit: 27cddfe)
The file was modified CMakeLists.txt (diff)
The file was modified src/plugins/api/BioSignalMLAPI/CMakeLists.txt (diff)
Commit 4d824deba41306652229aa4c5faef2fb315c34d0 by Alan Garny
QtWebKit package: make sure that our generated CMake files are properly
patched (#1391).
(commit: 4d824de)
The file was modified src/3rdparty/QtWebKit/CMakeLists.txt (diff)
The file was modified cmake/patchcmake.c (diff)
Commit e0798651bb74b76c1d3c84dd9cc5d8bb2a586097 by dave
Linux: rebuild BioSignalML libraries for GCC 5.4 (#1391)
(commit: e079865)
The file was modified src/plugins/api/BioSignalMLAPI/CMakeLists.txt (diff)
Commit d623ac928b642103fc02c80c58f94fdff14e7ef2 by Alan Garny
Updated our QtWebKit package (#1391).
(commit: d623ac9)
The file was modified src/3rdparty/QtWebKit/CMakeLists.txt (diff)
Commit 8e2e9234fd490dc982540671a7a13a964d1445d4 by Alan Garny
Some minor cleaning up (#1391) [ci skip].
(commit: 8e2e923)
The file was modified CMakeLists.txt (diff)
Commit 0a3a16d677dbdb8d5a466366d0cb2a5fcdcfa58c by Alan Garny
Zinc package: slight update to our tests until we formally upgrade to
Zinc 3.1.2 (#1391) [ci skip].
(commit: 0a3a16d)
The file was modified src/plugins/thirdParty/Zinc/tests/tests.cpp (diff)
Commit dbf0b5a64e89c2e36233c046410c85f7be36ac4f by Alan Garny
Travis CI: check whether there is an Ubuntu 16.04 LTS machine that we
could use (#1391).
Indeed, we now build everything on Ubuntu 16.04 LTS (Xenial), so to rely
on Ubuntu 14.04 LTS (Trusty) is not really an option anymore (it breaks
things; see https://travis-ci.org/opencor/opencor/jobs/263037249).
(commit: dbf0b5a)
The file was modified .travis.yml (diff)
Commit d3ba50f7fa82e6000137ba207919f41d234c3b4b by Alan Garny
Updated our SBML and SED-ML API packages (#1391).
Indeed, our SBML API package didn’t have support for bzip2, which we
need (for our tests, if anything). Now, because our SED-ML API package
depends on our SBML one, we also updated it just to be on the safe side.
(commit: d3ba50f)
The file was modified src/plugins/api/SEDMLAPI/CMakeLists.txt (diff)
The file was modified src/plugins/api/SBMLAPI/CMakeLists.txt (diff)
Commit 87eb138b77baf0d2f05cdf5c2cd864b4257f8966 by Alan Garny
Travis CI: well, no Ubuntu 16.04 LTS available, so reverting to Ubuntu
14.04 LTS and see what we can do with it (#1391).
See https://travis-ci.org/opencor/opencor/jobs/263072654, although we
asked for the xenial distribution, Travis CI doesn’t know about it and
therefore went for its current default distribution, which is trusty.
(commit: 87eb138)
The file was modified .travis.yml (diff)
Commit 6d82c517d110b353e7dd9af3556ae587b9667010 by Alan Garny
Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=0 makes any
difference (#1391).
(commit: 6d82c51)
The file was modified CMakeLists.txt (diff)
Commit abacefc65ac60302d0125e1b380d9d92d11204e3 by Alan Garny
Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=0 makes any
difference (#1391).
(commit: abacefc)
The file was modified src/plugins/dataStore/CSVDataStore/src/csvdatastoreexporter.cpp (diff)
The file was modified CMakeLists.txt (diff)
Commit 894b963fa0cea1577fffd660d1b20b9b29a7579a by Alan Garny
Travis CI: see whether defining _GLIBCXX_USE_CXX11_ABI=1 makes any
difference (#1391).
(commit: 894b963)
The file was modified CMakeLists.txt (diff)
Commit 4fd001935b733b39a59388be82ecfa18059162a5 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 4fd0019)
The file was modified .travis.yml (diff)
The file was modified CMakeLists.txt (diff)
Commit 557325c5f1697620cce9d92bcad42f601fd13522 by Alan Garny
Reverted part of commit abacefc (oops!) (#1391) [ci skip].
(commit: 557325c)
The file was modified src/plugins/dataStore/CSVDataStore/src/csvdatastoreexporter.cpp (diff)
Commit b1a9ba356bf9a328e2efe063d7220357ae45d7d7 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: b1a9ba3)
The file was modified .travis.yml (diff)
Commit ce24071a112dafee03b30cbc9afdff823e7958bf by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: ce24071)
The file was modified .travis.yml (diff)
Commit a10306d089a2b15f2c16c3715930661b910c278a by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: a10306d)
The file was modified CMakeLists.txt (diff)
Commit 675bbf6bc4ccc6834ca98d195804e4ec6bfdaf57 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 675bbf6)
The file was modified CMakeLists.txt (diff)
Commit 942c13e9cc44609f6204ec18f0b1c640b5eeabbd by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 942c13e)
The file was modified .travis.yml (diff)
The file was modified CMakeLists.txt (diff)
Commit d098a5d35b6c6d2541ac9b40679272c3986802c1 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: d098a5d)
The file was modified .travis.yml (diff)
Commit 5c9d6c038868ae2397d3c23bee9749a55c8b5484 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 5c9d6c0)
The file was modified .travis.yml (diff)
Commit fcbdbac21107b0a93e995515fcf884ab3883c3e8 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: fcbdbac)
The file was modified .travis.yml (diff)
The file was modified cmake/common.cmake (diff)
Commit 0d5c089b69c6a84bc8690b814bf293b5aa846007 by Alan Garny
Plugin tests: make sure that their external dependencies are set in the
same way as for their corresponding plugins (#1391).
Who know, that might explain why things don’t work on Travis CI?!
(commit: 0d5c089)
The file was modified cmake/common.cmake (diff)
Commit c3a3853489407ed26d17d0f744fc22c737c7eb3b by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: c3a3853)
The file was modified cmake/common.cmake (diff)
Commit 893348195e1bec7dd4839354b32cd1430fff266c by Alan Garny
Trying to remove some RPath information on Linux (#1391).
I get the feeling that it might not be needed…
(commit: 8933481)
The file was modified cmake/common.cmake (diff)
The file was modified CMakeLists.txt (diff)
Commit eb6b6180ee0164ac0cdb651eee949c97f810d9dc by Alan Garny
Trying to remove some RPath information on Linux (#1391).
(commit: eb6b618)
The file was modified cmake/common.cmake (diff)
Commit d1c454580f400c8280df503d9078e2632b6bae12 by Alan Garny
Trying to remove some RPath information on Linux (#1391).
(commit: d1c4545)
The file was modified CMakeLists.txt (diff)
Commit bc2d8ed1390f7307fd139610cbee7247523d3b70 by Alan Garny
Ok, removing some RPath information on Linux wasn't a good idea! (#1391)
(commit: bc2d8ed)
The file was modified cmake/common.cmake (diff)
Commit 0d46c88c5a54d0fd1f073f07fa13f4d33db42b6a by Alan Garny
Some minor cleaning up [ci skip].
(commit: 0d46c88)
The file was modified cmake/common.cmake (diff)
Commit 95f67df5d9a1337d42d7364106f4b5c108b46d9f by Alan Garny
Travis CI: trying not to use GCC/G++ 5.x (#1391).
That really ought not to work!
(commit: 95f67df)
The file was modified .travis.yml (diff)
Commit a7f7919b5a4388d5ea2bbff6dabf672ed49a52ce by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: a7f7919)
The file was modified .travis.yml (diff)
Commit 6254f34a34eb892e23820d3fe00c5bfa6c1cf7c6 by Alan Garny
Travis CI: trying not to use GCC/G++ 5.x (#1391).
(commit: 6254f34)
The file was modified CMakeLists.txt (diff)
The file was modified .travis.yml (diff)
Commit dabe8abec2e0081be47f7e948a2a652b084c7074 by Alan Garny
Travis CI: trying not to use GCC/G++ 5.x (#1391).
(commit: dabe8ab)
The file was modified CMakeLists.txt (diff)
Commit 6ee0d34d117609e4629f79664af5ff766419cbfa by Alan Garny
Travis CI: trying not to use GCC/G++ 5.x (#1391).
(commit: 6ee0d34)
The file was modified CMakeLists.txt (diff)
Commit 227480cc387986e93c2b1a19b0163945f9de942e by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 227480c)
The file was modified .travis.yml (diff)
The file was modified CMakeLists.txt (diff)
Commit 57b0001aad6d919671618456dd042714b9e29d90 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 57b0001)
The file was modified CMakeLists.txt (diff)
The file was modified CMakeLists.txt (diff)
Commit 33e11e1b042bdf72f9728585f35188307dab27f2 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 33e11e1)
The file was modified cmake/common.cmake (diff)
Commit 8f746aa9c5ba7f0c1a4473202dad085f2b6bcef7 by Alan Garny
Travis CI: trying to understand that GCC/G++ issue on Ubuntu (#1391).
(commit: 8f746aa)
The file was modified cmake/common.cmake (diff)
Commit 32e5067b4bed035ce755289f3eaa0141437c2561 by Alan Garny
Some minor cleaning up [ci skip].
(commit: 32e5067)
The file was modified .travis.yml (diff)
Commit ec7d4e6fcc272864dc8c1b95c88f2c53cac05b05 by Alan Garny
Travis CI: temporarily (hopefully) disable building and running our
tests on Linux (#1391).
Indeed, to build our tests on Linux keeps failing. It might due to a
discrepancy between Ubuntu 14.04 LTS (which is used on Travis CI) and
Ubuntu 16.04 LTS, which we now use for building OpenCOR.
(commit: ec7d4e6)
The file was modified .travis.yml (diff)
Commit 70e289499b12c63e7593f7a3f382d89b9c00848c by Alan Garny
Travis CI: temporarily (hopefully) disable building and running our
tests on Linux (#1391).
Indeed, to build our tests on Linux keeps failing. It might due to a
discrepancy between Ubuntu 14.04 LTS (which is used on Travis CI) and
Ubuntu 16.04 LTS, which we now use for building OpenCOR.
(commit: 70e2894)
The file was modified .travis.yml (diff)