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nticate","userData","email"],"sources":["node_modules/@abi-software/flatmapvuer/src/components/AnnotationTool.vue"],"sourcesContent":["<template>\n  <el-main class=\"main\">\n    <div class=\"block\">\n      <el-row class=\"info-field\">\n        <span class=\"title\">Feature Annotations</span>\n      </el-row>\n      <template v-if=\"annotationEntry\">\n        <el-row\n          v-for=\"(key, label) in displayPair\"\n          v-show=\"annotationEntry[key]\"\n          class=\"dialog-text\"\n          :key=\"key\"\n        >\n            <strong>{{ label }}: </strong> {{ annotationEntry[key] }}\n        </el-row>\n        <template v-if=\"prevSubs.length > 0\">\n          <div v-show=\"showSubmissions\" class=\"hide\" @click=\"showSubmissions = false\">\n            Hide previous submissions\n            <i class=\"el-icon-arrow-up\"></i>\n          </div>\n          <div v-show=\"!showSubmissions\" class=\"hide\" @click=\"showSubmissions = true\">\n            Show previous {{ prevSubs.length }} submission(s)\n            <i class=\"el-icon-arrow-down\"></i>\n          </div>\n          <template v-if=\"showSubmissions\">\n            <el-row class=\"dialog-spacer\"></el-row>\n            <el-row class=\"dialog-text\">\n              <strong class=\"sub-title\">Previous submissions:</strong>\n            </el-row>\n            <div class=\"entry\" v-for=\"(sub, index) in prevSubs\" :key=\"index\">\n              <el-row class=\"dialog-text\">\n                <strong>{{ formatTime(sub.created) }}</strong> {{ sub.creator.name }}\n              </el-row>\n              <el-row class=\"dialog-text\">\n                <strong>Evidence: </strong> \n                <el-row v-for=\"(evidence) in sub.evidence\" :key=\"evidence\" class=\"dialog-text\">\n                  <a  :href=\"evidence\" target=\"_blank\"> {{ evidence }}</a>\n                </el-row>\n              </el-row>\n              <el-row class=\"dialog-text\">\n                <strong>Comment: </strong> {{ sub.comment }}\n              </el-row>\n            </div>\n          </template>\n        </template>\n        <template v-if=\"authenticated\">\n          <template v-if=\"isEditable\">\n            <el-row class=\"dialog-spacer\"></el-row>\n            <el-row v-if=\"!editing\">\n              <i\n                class=\"el-icon-edit standard-icon\"\n                @click=\"editing = true\"\n              />\n            </el-row>\n            <template v-else>\n              <el-row class=\"dialog-text\">\n                <strong class=\"sub-title\">Suggest changes:</strong>\n              </el-row>\n              <el-row class=\"dialog-text\">\n                <strong>Evidvence:</strong>\n              </el-row>\n              <el-row v-for=\"(value, index) in evidence\" :key=\"value\">\n                <el-col :span=\"20\">   \n                  {{ evidence[index] }}\n                </el-col>\n                <el-col :span=\"4\">\n                  <i\n                    class=\"el-icon-close standard-icon\"\n                    @click=\"removeEvidence(index)\"\n                  />\n                </el-col>\n              </el-row>\n              <el-row>\n                <el-input\n                  size=\"mini\"\n                  placeholder=\"Enter\"\n                  v-model=\"newEvidence\"\n                  @change=\"evidenceEntered($event)\"\n                >\n                  <el-select\n                    :popper-append-to-body=\"false\"\n                    v-model=\"evidencePrefix\"\n                    placeholder=\"Select\"\n                    class=\"select-box\"\n                    popper-class=\"flatmap_dropdown\"\n                    slot=\"prepend\"\n                  >\n                    <el-option v-for=\"item in evidencePrefixes\" :key=\"item\" :label=\"item\" :value=\"item\">\n                      <el-row>\n                        <el-col :span=\"12\">{{ item }}</el-col>\n                      </el-row>\n                    </el-option>\n                  </el-select>\n                </el-input>\n              </el-row>\n              <el-row>\n                <strong>Comment:</strong>\n              </el-row>\n              <el-row class=\"dialog-text\">\n                <el-input\n                  type=\"textarea\"\n                  :autosize=\"{ minRows: 2, maxRows: 4}\"\n                  placeholder=\"Enter\"\n                  v-model=\"comment\"\n                />\n              </el-row>\n                <el-row class=\"dialog-text\">\n                  <el-button\n                    class=\"button\"\n                    type=\"primary\"\n                    plain\n                    @click=\"submit\"\n                  >\n                    Submit\n                  </el-button>\n              </el-row>\n            </template>\n            <el-row class=\"dialog-text\" v-if=\"errorMessage\">\n              <strong class=\"sub-title\"> {{ errorMessage }}\n              </strong>\n            </el-row>\n          </template>\n        </template>\n      </template>\n    </div>\n  </el-main>\n</template>\n\n\n<script>\n/* eslint-disable no-alert, no-console */\n/* eslint-disable no-alert, no-console */\nimport Vue from \"vue\";\nimport { AnnotationService } from \"@abi-software/sparc-annotation\";\nimport { Button, Col, Input, Main, Row, Select } from \"element-ui\";\nimport lang from \"element-ui/lib/locale/lang/en\";\nimport locale from \"element-ui/lib/locale\";\n\nlocale.use(lang);\nVue.use(Button);\nVue.use(Col);\nVue.use(Input);\nVue.use(Main);\nVue.use(Row);\nVue.use(Select);\n\nexport default {\n  name: \"AnnotationTool\",\n  props: {\n    annotationEntry: {\n      type: Object,\n    },\n  },\n  inject: ['flatmapAPI'],\n  data: function() {\n    return {\n      displayPair: {\n        \"Feature ID\": \"featureId\",\n        \"Tooltip\": \"label\",\n        \"Models\": \"models\",\n        \"Name\": \"name\",\n        \"Resource\": \"resourceId\"\n      },\n      editing: false,\n      evidencePrefixes:  [\n        \"DOI:\",\n        \"PMID:\",\n      ],\n      evidencePrefix: \"DOI:\", \n      evidence: [ ],\n      authenticated: false,\n      newEvidence: '',\n      comment: '',\n      prevSubs: [ ],\n      showSubmissions: true,\n      errorMessage: \"\",\n    }\n  },\n  computed: {\n    isEditable: function() {\n      return this.annotationEntry['resourceId'] && this.annotationEntry['featureId'];\n    },\n  },\n  methods: {\n    evidenceEntered: function(value) {\n      if (value) {\n        this.evidence.push(this.evidencePrefix + value);\n        this.newEvidence = \"\";\n      }\n    },\n    formatTime: function(dateString) {\n      const options = { year: \"numeric\", month: \"long\", day: \"numeric\", \n        hour: \"numeric\", minute: \"numeric\", second: \"numeric\" };\n      return new Date(dateString).toLocaleDateString(undefined, options);\n    },\n    updatePrevSubmissions: function() {\n      if (this.$annotator && this.authenticated) {\n        if (this.annotationEntry['resourceId'] &&\n          this.annotationEntry['featureId']) {\n          this.$annotator.itemAnnotations(this.annotationEntry['resourceId'],\n          this.annotationEntry['featureId']).then((value) => {\n            this.prevSubs = value;\n          })\n          .catch((reason) => {\n            console.log(reason); // Error!\n          });\n        }\n      }\n    },\n    submit: function() {\n      if ((this.evidence.length > 0) || this.comment) {\n        if (this.annotationEntry['resourceId'] &&\n          this.annotationEntry['featureId']) {\n          const evidenceURLs = [];\n          this.evidence.forEach((evidence) => {\n            if (evidence.includes(\"DOI:\")) {\n              const link = evidence.replace(\"DOI:\", \"https://doi.org/\");\n              evidenceURLs.push(new URL(link));\n            } else if (evidence.includes(\"PMID:\")) {\n              const link = evidence.replace(\"PMID:\", \"https://pubmed.ncbi.nlm.nih.gov/\");\n              evidenceURLs.push(new URL(link));\n         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