const nerveMaps = [ { "id": "ilxtr:neuron-type-keast-13", "centrelines": [ "n_71" ] }, { "id": "ilxtr:neuron-type-keast-2", "centrelines": [ "bladder_n" ] }, { "id": "ilxtr:neuron-type-keast-3", "centrelines": [ "bladder_n", "hypogastric_n" ] }, { "id": "ilxtr:neuron-type-keast-15", "centrelines": [ "n_73" ] }, { "id": "ilxtr:neuron-type-keast-1", "centrelines": [ "bladder_n" ] }, { "id": "ilxtr:neuron-type-keast-7", "centrelines": [ "L1_ventral_root_ramus", "L1_spinal_n-1", "lumbar_splanchnic_n", "L2_spinal_n", "L2_ventral_root_ramus" ] }, { "id": "ilxtr:neuron-type-keast-9", "centrelines": [ "L6_spinal_n-1", "L6_ventral_root", "pudendal_n", "L5_spinal_n", "L5_ventral_root" ] }, { "id": "ilxtr:neuron-type-keast-10", "centrelines": [ "S1_dorsal_root", "S1_spinal_n-2", "pelvic_splanchnic_n", "L6_spinal_n-2", "L6_dorsal_root", "bladder_n" ] }, { "id": "ilxtr:neuron-type-keast-11", "centrelines": [ "lumbar_splanchnic_n", "L2_spinal_n", "L1_spinal_n-1", "hypogastric_n", "bladder_n", "L1_dorsal_root", "L2_dorsal_root" ] }, { "id": "ilxtr:neuron-type-keast-12", "centrelines": [ "L6_spinal_n-1", "L6_dorsal_root", "pudendal_n", "S1_spinal_n-1", "S1_dorsal_root" ] }, { "id": "ilxtr:neuron-type-keast-8", "centrelines": [ "L1_ventral_root_paravertebral_ganglion", "L1-L2_interganglionic_segment", "sympathetic_trunk_T13-L1", "L2_ventral_root_paravertebral_ganglion", "sympathetic_trunk_L2-L3", "sympathetic_trunk_L4-L5", "sympathetic_trunk_L3-L4", "sympathetic_trunk_L5-L6", "sympathetic_trunk_T12-T13" ] }, { "id": "ilxtr:neuron-type-keast-20", "centrelines": [ "T1_T2_cns", "C8_T1_cns", "T2_T3_cns", "T10_T11_cns", "T9_T10_cns", "T11_T12_cns", "T8_T9_cns", "C7_C8_cns", "C6_C7_cns", "C4_C5_cns", "C3_C4_cns", "C5_C6_cns", "medulla_C1_cns", "pons_medulla_cns", "C1_C2_cns", "T5_T6_cns", "T4_T5_cns", "T6_T7_cns", "L3_L4_cns", "L2_L3_cns", "L4_L5_cns", "L5_L6_cns", "T13_L1_cns", "T12_T13_cns", "L1_L2_cns", "T3_T4_cns", "n_69", "C2_C3_cns", "T7_T8_cns" ] }, { "id": "ilxtr:neuron-type-keast-16", "centrelines": [ "n_74" ] }, { "id": "ilxtr:neuron-type-keast-4", "centrelines": [ "sympathetic_trunk_L6-S1", "L6_gray_ramus-spinal_n", "sympathetic_trunk_L5-L6", "S1_gray_ramus-spinal_n", "S1_spinal_n-2", "pelvic_splanchnic_n", "L6_spinal_n-2", "L1-L2_interganglionic_segment", "sympathetic_trunk_T13-L1", "sympathetic_trunk_L2-L3", "bladder_n", "sympathetic_trunk_L4-L5", "sympathetic_trunk_L3-L4", "sympathetic_trunk_T12-T13" ] }, { "id": "ilxtr:neuron-type-keast-17", "centrelines": [ "n_75" ] }, { "id": "ilxtr:neuron-type-keast-5", "centrelines": [ "S1_ventral_root", "S1_spinal_n-2", "pelvic_splanchnic_n", "L6_spinal_n-2", "L6_ventral_root" ] }, { "id": "ilxtr:neuron-type-keast-18", "centrelines": [ "n_70" ] }, { "id": "ilxtr:neuron-type-keast-6", "centrelines": [ "L1_ventral_root_ramus", "L1_spinal_n-1", "lumbar_splanchnic_n", "L2_spinal_n", "hypogastric_n", "L2_ventral_root_ramus" ] }, { "id": "ilxtr:neuron-type-keast-19", "centrelines": [ "n_69" ] }, { "id": "ilxtr:neuron-type-keast-14", "centrelines": [ "n_72" ] } ]; function getRatTerms() { return [ {id: "UBERON:0000948", name: "Heart", type:"simulation"}, {id: "UBERON:0001156", name: "Colon", type:"simulation"}, {id: "UBERON:0001255", name: "Bladder", type:"simulation"}, {id: "UBERON:0000945", name: "Stomach", type:"simulation"}, {id: "UBERON:0001759", name: "Vagus nerve", type:"simulation"}, {id: "UBERON:0002108", name: "Small intestines", type:"simulation"}, {id: "UBERON:0002107", name: "Liver", type:"simulation"}, ]; } export function getAvailableTermsForSpecies() { return getRatTerms(); } // Find the id/centre lines for the matchin centre lines/id export function getNerveNames(name) { if (name) { for (let i = 0; i < nerveMaps.length ; i++) { if (nerveMaps[i].id == name) { return nerveMaps[i].centrelines; } const found = nerveMaps[i].centrelines.find(element => element === name); if (found) return [nerveMaps[i].id]; } } return []; } export function getParentsRegion(name) { if (name) { const lName = name.toLowerCase() if (lName.includes('heart')) { return {id: 'UBERON:0000948', name: 'Heart'}; } else if (lName.includes('liver')) { return {id: 'UBERON:0002107', name: 'Liver'}; } else if (lName.includes('stomach')) { return {id: 'UBERON:0000945', name: 'Stomach'}; } else if (lName.includes('colon')) { return {id: 'UBERON:0001156', name: 'Colon'}; } else if (lName.includes('bladder')) { return {id: 'UBERON:0001255', name: 'Bladder'}; } } return undefined; }