Started by GitHub push by nickerso Started by user David Nickerson Rebuilds build #45 Building remotely on Ubuntu_16.04_bioeng49 (buildslave Testing) in workspace /home/cmiss/Jenkins/workspace/PhysiomeJournalDevelopmentSite No credentials specified Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/Physiome/journal-website > git init /home/cmiss/Jenkins/workspace/PhysiomeJournalDevelopmentSite # timeout=10 Fetching upstream changes from https://github.com/Physiome/journal-website > git --version # timeout=10 > git fetch --tags --progress https://github.com/Physiome/journal-website +refs/heads/*:refs/remotes/origin/* > git config remote.origin.url https://github.com/Physiome/journal-website # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/Physiome/journal-website # timeout=10 Fetching upstream changes from https://github.com/Physiome/journal-website > git fetch --tags --progress https://github.com/Physiome/journal-website +refs/heads/*:refs/remotes/origin/* > git rev-parse refs/remotes/origin/journaldev^{commit} # timeout=10 > git rev-parse refs/remotes/origin/origin/journaldev^{commit} # timeout=10 Checking out Revision f5638abd04f8ead41d57d2366bc17d8f31a3591f (refs/remotes/origin/journaldev) > git config core.sparsecheckout # timeout=10 > git checkout -f f5638abd04f8ead41d57d2366bc17d8f31a3591f Commit message: "Merge pull request #31 from nickerso/logo-tweaks" > git rev-list --no-walk f5638abd04f8ead41d57d2366bc17d8f31a3591f # timeout=10 [Set GitHub commit status (universal)] PENDING on repos [GHRepository@26a8980e[description=Source for journal.physiomeproject.org.,homepage=<null>,name=journal-website,fork=false,archived=false,size=14844,milestones={},language=HTML,commits={},source=<null>,parent=<null>,responseHeaderFields={null=[HTTP/1.1 200 OK], Access-Control-Allow-Origin=[*], Access-Control-Expose-Headers=[ETag, Link, Location, Retry-After, X-GitHub-OTP, X-RateLimit-Limit, X-RateLimit-Remaining, X-RateLimit-Reset, X-OAuth-Scopes, X-Accepted-OAuth-Scopes, X-Poll-Interval, X-GitHub-Media-Type], Cache-Control=[private, max-age=60, s-maxage=60], Content-Encoding=[gzip], Content-Security-Policy=[default-src 'none'], Content-Type=[application/json; charset=utf-8], Date=[Sun, 21 Jul 2019 22:17:30 GMT], ETag=[W/"2f2ee08f14df91bd0738fa1ebd294def"], Last-Modified=[Sun, 21 Jul 2019 21:49:59 GMT], OkHttp-Received-Millis=[1563747450980], OkHttp-Response-Source=[CONDITIONAL_CACHE 200], OkHttp-Selected-Protocol=[http/1.1], OkHttp-Sent-Millis=[1563747450712], Referrer-Policy=[origin-when-cross-origin, strict-origin-when-cross-origin], Server=[GitHub.com], Status=[200 OK], Strict-Transport-Security=[max-age=31536000; includeSubdomains; preload], Transfer-Encoding=[chunked], Vary=[Accept, Authorization, Cookie, X-GitHub-OTP, Accept-Encoding], X-Accepted-OAuth-Scopes=[repo], X-Content-Type-Options=[nosniff], X-Frame-Options=[deny], X-GitHub-Media-Type=[github.v3; format=json], X-GitHub-Request-Id=[9C8E:638D:27ACA6:302FA8:5D34E47A], X-OAuth-Scopes=[admin:repo_hook, repo, repo:status], X-RateLimit-Limit=[5000], X-RateLimit-Remaining=[4994], X-RateLimit-Reset=[1563751050], X-XSS-Protection=[1; mode=block]},url=https://api.github.com/repos/Physiome/journal-website,id=94735176]] (sha:f5638ab) with context:journaldev-build Setting commit status on GitHub for https://github.com/Physiome/journal-website/commit/f5638abd04f8ead41d57d2366bc17d8f31a3591f [PhysiomeJournalDevelopmentSite] $ /usr/bin/python2.7 /home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenv.py /home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9 New python executable in /home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/bin/python2.7 Also creating executable in /home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/bin/python Installing setuptools, pip, wheel...done. [PhysiomeJournalDevelopmentSite] $ /bin/sh -xe /tmp/shiningpanda18204686246821162455.sh + make deps pip install -r py-requirements.txt DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. Collecting pelican>3.6 (from -r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/ba/38/9969a46cf0e15b14858e48f4933cc89baf5fb51cf6160a86e65435bc8dbb/pelican-4.1.0-py2.py3-none-any.whl Collecting markdown (from -r py-requirements.txt (line 2)) Using cached https://files.pythonhosted.org/packages/c0/4e/fd492e91abdc2d2fcb70ef453064d980688762079397f779758e055f6575/Markdown-3.1.1-py2.py3-none-any.whl Collecting six>=1.4 (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl Collecting pytz>=0a (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/3d/73/fe30c2daaaa0713420d0382b16fbb761409f532c56bdcc514bf7b6262bb6/pytz-2019.1-py2.py3-none-any.whl Collecting unidecode (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/d0/42/d9edfed04228bacea2d824904cae367ee9efd05e6cce7ceaaedd0b0ad964/Unidecode-1.1.1-py2.py3-none-any.whl Collecting jinja2>=2.7 (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/1d/e7/fd8b501e7a6dfe492a433deb7b9d833d39ca74916fa8bc63dd1a4947a671/Jinja2-2.10.1-py2.py3-none-any.whl Collecting feedgenerator>=1.9 (from pelican>3.6->-r py-requirements.txt (line 1)) Collecting python-dateutil (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/41/17/c62faccbfbd163c7f57f3844689e3a78bae1f403648a6afb1d0866d87fbb/python_dateutil-2.8.0-py2.py3-none-any.whl Collecting pygments (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/5c/73/1dfa428150e3ccb0fa3e68db406e5be48698f2a979ccbcec795f28f44048/Pygments-2.4.2-py2.py3-none-any.whl Collecting blinker (from pelican>3.6->-r py-requirements.txt (line 1)) Collecting docutils (from pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/f1/12/1c1004e2fdf9f50a05e31b628e9b2c4b197b62a20b0d4a59f0c835117340/docutils-0.15-py2-none-any.whl Requirement already satisfied: setuptools>=36 in /home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/lib/python2.7/site-packages (from markdown->-r py-requirements.txt (line 2)) (41.0.1) Collecting MarkupSafe>=0.23 (from jinja2>=2.7->pelican>3.6->-r py-requirements.txt (line 1)) Using cached https://files.pythonhosted.org/packages/fb/40/f3adb7cf24a8012813c5edb20329eb22d5d8e2a0ecf73d21d6b85865da11/MarkupSafe-1.1.1-cp27-cp27mu-manylinux1_x86_64.whl Installing collected packages: six, pytz, unidecode, MarkupSafe, jinja2, feedgenerator, python-dateutil, pygments, blinker, docutils, pelican, markdown Successfully installed MarkupSafe-1.1.1 blinker-1.4 docutils-0.15 feedgenerator-1.9 jinja2-2.10.1 markdown-3.1.1 pelican-4.1.0 pygments-2.4.2 python-dateutil-2.8.0 pytz-2019.1 six-1.12.0 unidecode-1.1.1 + make html pelican /home/cmiss/Jenkins/workspace/PhysiomeJournalDevelopmentSite/content -o /home/cmiss/Jenkins/workspace/PhysiomeJournalDevelopmentSite/output -s /home/cmiss/Jenkins/workspace/PhysiomeJournalDevelopmentSite/pelicanconf.py Traceback (most recent call last): File "/home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/bin/pelican", line 6, in <module> from pelican.__main__ import main File "/home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/local/lib/python2.7/site-packages/pelican/__init__.py", line 25, in <module> from pelican.generators import (ArticlesGenerator, PagesGenerator, File "/home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/local/lib/python2.7/site-packages/pelican/generators.py", line 23, in <module> from pelican.readers import Readers File "/home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/local/lib/python2.7/site-packages/pelican/readers.py", line 10, in <module> import docutils.core File "/home/cmiss/Jenkins/shiningpanda/jobs/888df718/virtualenvs/d41d8cd9/local/lib/python2.7/site-packages/docutils/core.py", line 246 print('\n::: Runtime settings:', file=self._stderr) ^ SyntaxError: invalid syntax Makefile:64: recipe for target 'html' failed make: *** [html] Error 1 Build step 'Virtualenv Builder' marked build as failure [Set GitHub commit status (universal)] ERROR on repos [GHRepository@664e1e56[description=Source for journal.physiomeproject.org.,homepage=<null>,name=journal-website,fork=false,archived=false,size=14844,milestones={},language=HTML,commits={},source=<null>,parent=<null>,responseHeaderFields={null=[HTTP/1.1 200 OK], Access-Control-Allow-Origin=[*], Access-Control-Expose-Headers=[ETag, Link, Location, Retry-After, X-GitHub-OTP, X-RateLimit-Limit, X-RateLimit-Remaining, X-RateLimit-Reset, X-OAuth-Scopes, X-Accepted-OAuth-Scopes, X-Poll-Interval, X-GitHub-Media-Type], Cache-Control=[private, max-age=60, s-maxage=60], Content-Encoding=[gzip], Content-Security-Policy=[default-src 'none'], Content-Type=[application/json; charset=utf-8], Date=[Sun, 21 Jul 2019 22:17:30 GMT], ETag=[W/"2f2ee08f14df91bd0738fa1ebd294def"], Last-Modified=[Sun, 21 Jul 2019 21:49:59 GMT], OkHttp-Received-Millis=[1563747450980], OkHttp-Response-Source=[CACHE 200], OkHttp-Selected-Protocol=[http/1.1], OkHttp-Sent-Millis=[1563747450712], Referrer-Policy=[origin-when-cross-origin, strict-origin-when-cross-origin], Server=[GitHub.com], Status=[200 OK], Strict-Transport-Security=[max-age=31536000; includeSubdomains; preload], Transfer-Encoding=[chunked], Vary=[Accept, Authorization, Cookie, X-GitHub-OTP, Accept-Encoding], X-Accepted-OAuth-Scopes=[repo], X-Content-Type-Options=[nosniff], X-Frame-Options=[deny], X-GitHub-Media-Type=[github.v3; format=json], X-GitHub-Request-Id=[9C8E:638D:27ACA6:302FA8:5D34E47A], X-OAuth-Scopes=[admin:repo_hook, repo, repo:status], X-RateLimit-Limit=[5000], X-RateLimit-Remaining=[4994], X-RateLimit-Reset=[1563751050], X-XSS-Protection=[1; mode=block]},url=https://api.github.com/repos/Physiome/journal-website,id=94735176]] (sha:f5638ab) with context:journaldev-build Setting commit status on GitHub for https://github.com/Physiome/journal-website/commit/f5638abd04f8ead41d57d2366bc17d8f31a3591f Finished: FAILURE