Changes

Renamed ULLONG_WIDTH to AttributeNumberWidth since it's defined by gcc
on Ubuntu 18.04 LTS.
 (commit: 2a62ea0)

Prevent a deprecated warnings for the CellML API on Ubuntu 18.04 LTS.
 (commit: 3faee38)

Make sure that our plugins use RPATH rather than RUNPATH on Linux.
 (commit: 608befc)

Make sure that OpenCOR itself uses RPATH rather than RUNPATH on Linux.
 (commit: 11a75c1)

Properly deploy some system libraries on Linux.
 (commit: 116f084)

Only build the SUNDIALS package (#1643).
 (commit: 6443a4b)

SUNDIALS package: upgraded to version 3.1.1 (#1643).
 (commit: 6066f9c)

SUNDIALS package: upgraded to version 3.1.1 (#1643).
 (commit: 61d3610)

SUNDIALS package: new binaries (#1643).
 (commit: ce68061)

Slight update to our downloads page (#1643).
 (commit: 68dc3c4)

Don't build the SUNDIALS package only (#1643).
 (commit: a76a8f8)

QtWebKit package: updated our macOS binary.
 (commit: 8d953e1)

QtWebKit package: slight update to our README.rst file.
 (commit: ae2786e)

Only build the QtWebKit package.
 (commit: 0a195c2)

QtWebKit package: slight update to our README.rst file.
 (commit: c8c591d)

Some minor cleaning up.
 (commit: b0c204e)

QtWebKit package: slight update to our README.rst file.
 (commit: f382264)

QtWebKit package: slight update to our README.rst file.
 (commit: 43b85bd)

QtWebKit package: statically link libjpeg.
 (commit: 3229db2)

QtWebKit package: statically link libpng.
 (commit: 9befc97)

QtWebKit package: statically link ZLIB.
 (commit: 50f3826)

QtWebKit package: slight update to our README.rst file.
 (commit: 49bd7f4)

QtWebKit package: have it depend on our copy of JPEG, PNG and ZLIB on
Linux and macOS.
 (commit: ec4d302)

Some minor cleaning up.
 (commit: a803ba8)

Some minor cleaning up.
 (commit: 955ba6c)

QtWebKit package: use -fPIC for JPEG, PNG and ZLIB (on Linux and macOS).
 (commit: b5108d9)

Some minor cleaning up.
 (commit: 3ea1979)

Some minor cleaning up.
 (commit: e4e20b3)

QtWebKit package: new Linux and macOS binaries.
 (commit: 46bd014)

QtWebKit package: new Windows binaries.
 (commit: d21e353)

Stop building only the QtWebKit package.
 (commit: e4e881b)

Some minor cleaning up.
 (commit: 2ea0a3f)

Some minor cleaning up.
 (commit: d227018)

Prevent OpenCOR from crashing when selecting Tools | Reset All.
It looks like this might (somehow?) be related to our use of the new 
signal/slot mechanism? At least, that seems to be the only difference 
between the 17 March and 23 April snapshots when it comes to 
MainWindow::updateDockWidgetsVisibility().
 (commit: d7823d2)

CellML Text view: keep track of a CellML file’s documentation (#1642).
 (commit: 6918a75)

Slight update to our downloads page (#1642).
 (commit: 4fe92aa)

Slight update to our downloads page (#1642).
 (commit: 53d91e9)

Only build LLVM+Clang (#1552).
 (commit: 2f3df74)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: 5d651b9)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: bbad500)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: 68993ad)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: 8c0b5a3)

LLVMClang package: new Linux and macOS binaries (#1552).
 (commit: c994a6e)

Stop building on LLVM+Clang (#1552).
 (commit: f2d8f9a)

Some minor cleaning up.
 (commit: edec2ba)

Simulation Experiment view: make sure that mGraphPanelsWidgetSizes gets
properly initialised upon export a SED-ML file / COMBINE archive.
 (commit: 77b8f0d)

Slight update to our downloads page (#1552).
 (commit: 2c48184)

LLVMClang package: new Windows binaries (#1552).
 (commit: 9d408ad)

Travis CI: upgraded to Qt 5.9.5.
 (commit: e2cf0a4)

Travis CI: some tests to understand why things are now failing...!?
 (commit: f684da1)

Travis CI: some tests to understand why things are now failing...!?
 (commit: 4efc751)

Travis CI: some tests to understand why things are now failing...!?
 (commit: 1d5582a)

Travis CI: some tests to understand why things are now failing...!?
 (commit: 2970f1c)

Travis CI: some tests to understand why things are now failing...!?
 (commit: b30eb74)

Travis CI: optimising the packages we need on Ubuntu.
 (commit: 05e42e9)

Travis CI: some tests to understand why things are now failing...!?
 (commit: ffe25c8)

Travis CI: optimising the packages we need on Ubuntu.
 (commit: fa7a4b6)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: 4f69cd0)

Built a special version of LLVM+Clang to see whether this is the cause
of our problems on Travis CI.
 (commit: 8e6cf78)

LLVMClang package: upgraded to version 6.0.0 (#1552).
 (commit: 35cb856)

Some minor cleaning up.
 (commit: e769589)

Stopped using Travis CI.
Indeed, we now have everything set up and working nicely on Jenkins. Not
only that, but issue #1552 is building/testing fine locally on Jenkins,
but not on Travis CI (though our Docker Ubuntu 16.04 LTS) and I am
really not sure why. I spent a full day trying to figure out, but to no
avail. So, since Jenkins is working (and also build/test on Windows and
macOS), we might as well only use that, not to mention that we can rely
ccache on Jenkins, thus making our builds faster.
 (commit: 3ed7b35)

Windows: prevent a warning when using LLVM+Clang.
 (commit: a250120)

Text-based editors: can now word-wrap an editor's contents (#1652).
 (commit: 694d043)

Some minor cleaning up.
 (commit: 7019ca0)

Editing view: updated our French translations (#1652).
 (commit: 73b9cdd)

Text-based editors: remember about word-wrapping (#1652).
 (commit: 31aafda)

Slight update to our downloads page (#1652).
 (commit: 444a736)

Slight update to our what's new page (#1652).
 (commit: d04d7bc)

Slight improvement to our MathML tests.
 (commit: dbefbe4)

Prevent a crash when leaving OpenCOR with a simulation still running.
 (commit: 7f70207)

macOS: properly handle the exiting of full-screen mode when pressing the
Esc key (#1637).
 (commit: 068b6ba)

Some minor cleaning up.
 (commit: b8e8e0b)

Some minor cleaning up.
 (commit: 395e0fb)

Text-based editors: now highlight all occurrences of a word throughout a
whole file (#1414).
 (commit: 06a2693)

Editor widget: customised our highlighting a bit (#1414).
 (commit: 2ed1042)

Editor widget: make sure that our highlighting is cleared whenever
necessary (#1414).
 (commit: 4407897)

Editor widget: make sure that our position is still the same after some
highlighting (#1414).
 (commit: 99fd778)

Some minor cleaning up (#1414).
 (commit: 4d6dca6)

Editor widget: make sure that our scrollbars are back to their original
position upon highlighting/replacing all (#1414).
 (commit: fbe6496)

QScintilla support: show our cursor position on our vertical scrollbar
(#1414).
 (commit: 461779e)

QScintilla widget: added support for the highlighting of lines on the
vertical scrollbar (#1414).
 (commit: b7cd952)

QScintilla editor: simplified our highlighting in the vertical scrollbar
(#1414).
Indeed, it used to be a bit too much in your face, not least because we 
can’t draw the slider “above” our highlights (as Chrome does).
 (commit: f92459f)

Slight updates to our downloads and what is new pages (#1414).
 (commit: b19b1ab)

QScintilla widget: take into account that on Windows and Linux, a
vertical scroll bar has both a up and down arrow button (#1414).
 (commit: f1b750a)

Moved our highlighting support code from QScintillaWidget to
EditorWidget (#1414).
 (commit: 650746d)

Editor widget: make sure that our scroll bar highlighting is properly
shifted on Windows and Linux (#1414).
 (commit: 2a1267d)

Some minor cleaning up (#1414).
 (commit: 0bfa895)

Some minor cleaning up.
 (commit: 209e0f3)

Some minor cleaning up.
 (commit: e2ce606)

Some minor cleaning up.
 (commit: 8ce33c5)

Some cleaning up (#1414).
 (commit: 41f949e)

Some minor cleaning up.
 (commit: 48f6f2e)

Editor widget: make sure that showing our find/replace widget not only
highlight all the occurrences of the current word, but also selects it
(#1414).
 (commit: 24f4cd0)

Some minor cleaning up.
 (commit: f67fbd0)

Some minor cleaning up.
 (commit: 3bd3c9f)

Editor widget: update the highlighted lines in our vertical scroll bar
when adding text (#1414).
 (commit: 00412d8)

Various work on the Editor widget (#1414).
- Put the code for our editor widget’s scroll bar in its own file.
- Added a new file for our editor widget itself
(EditorWidgetEditorWidget).
- Now properly handle the highlighting of all occurrences of a given 
word, i.e. the highlighting on the scroll bar is updated whenever 
adding/removing some text, deleting a selection, etc.
 (commit: e14985a)

Central widget: removed the need for mRemoteLocalFileNames.
 (commit: fc4a0d7)

Make sure that we hide our busy widget if we couldn't open a remote
file.
 (commit: b630110)

Some minor cleaning up (#1414).
 (commit: aa0f797)

Some minor cleaning up (#1414).
 (commit: b76fd3a)

Some minor cleaning up (#1414).
 (commit: 7997398)

CellML Text editing: handle un/commenting without relying on the
handling of a signal (#1414).
 (commit: 5f4ff66)

Don't associate an icon with a data store variable anymore (#1657).
 (commit: 1ce85a5)

Some minor cleaning up.
 (commit: d7322ff)

Editor widget: highlight all occurrences of a word that gets selected by
double clicking on it (#1414).
 (commit: 656e0bd)

Editor widget: optimised the highlighting/finding of some text (#1414).
 (commit: c71e5d9)

Editor widget: highlight all occurrences of a word that gets selected by
double clicking on it (#1414).
 (commit: 79dbaf5)

Editor widget: can now find a multiline piece of text (#1414).
 (commit: 66c0d5c)

Only initialise parameter type to QIcon map when it is first used
(#1657).
If initialisation is done at plugin load time then a CLI application
will crash as QIcon is a GUI class.
 (commit: 66e7e3d)

Some minor cleaning up (#1657).
 (commit: 40895b0)

Some minor cleaning up.
 (commit: adcd51b)

Removed unnecessary const  and const references.
 (commit: d5d0763)

Removed unnecessary const  and const references.
 (commit: b48badf)

Editor widget: make sure that we properly handle the use of TAB/BACKTAB.
Also improved our handling of the Esc key.
 (commit: b4b339b)

Editor widget: don't highlight a space-based string.
 (commit: 67c90eb)

Central widget: prevent a GUI glitch when changing modes.
 (commit: 771708d)

Some minor cleaning up.
 (commit: f1f00d2)

Revert "Central widget: prevent a GUI glitch when changing modes."
This reverts commit 771708d80c0d78d4765319a2fc0f6d57ef0a69d3.
Indeed, there is definitely no need for this. It’s just that there is 
something between the current codebase and that of 23 April 2018 (i.e. 
our latest snapshot) that is different and that results in the issue 
this commit was trying to address. In fact, there is another issue, 
which is that the Simulation Experiment view flashes a bit when 
switching to it and there are several graph panels, which results in the
N62 SED-ML file being considered modified while it clearly shouldn’t be
(and isn’t using the 2018-04-23 snapshot). So, we need to figure out
what we did that causes those issues…
 (commit: 19c8248)

Simulation Experiment view: now provide a default value for the legend
title of a valid graph (1662).
 (commit: a7381b2)

Slight update to our downloads page (#1662).
 (commit: 6f1a933)

Graph Panel widget: prevent a GUI glitch on Windows and Linux.
 (commit: ff1476f)

Some minor cleaning up.
 (commit: 42126ed)

Simulation Experiment view: make sure that mGraphPanelsWidgetSizes gets
properly initialised.
 (commit: 16adf6a)

Some minor cleaning up.
 (commit: 61ee1c2)

Some minor cleaning up.
 (commit: 4038227)

Prevent a warning on Linux.
 (commit: 2a1feed)

Prevent a couple of warnings on Linux.
 (commit: 947b6a6)

Some minor cleaning up.
 (commit: f16e91c)

Prevent a warning on Linux.
 (commit: e4d2ad2)

Some minor cleaning up.
 (commit: b0704d2)

Simulation Experiment view: now automatically assign a colour to a new
graph (#1665).
 (commit: 3bf0f90)

Graph Panel widget: enable our legend by default (#1665).
 (commit: 2c0eaec)

Graph Panel widget: make sure that we reset our colour sequence if all
the graphs have been removed (#1665).
 (commit: 787dc56)

Slight update to our downloads and what is new pages (#1665).
 (commit: 502c1fd)

Deployment: make sure that we deploy the qavfmediaplayer plugin on
macOS.
For some reasons, it's now needed...?! (Maybe because of QtWebKit?)
 (commit: d631ab6)

Simulation Experiment view: now export to SED-ML the selected state of a
graph (#1631).
 (commit: 2b2a611)

Simulation Experiment view: can now retrieve (from a SED-ML file) the
selected state of a graph (#1631).
 (commit: 63444a7)

Some minor cleaning up.
 (commit: 07ee6a6)

Slight update to our downloads page (#1631).
 (commit: 0b332c6)

Some minor cleaning up (#1631).
 (commit: 4ec66c4)

Some minor cleaning up (#1631).
 (commit: 53435ed)

Graph Panel widget: a graph can now be initialised selected or
unselected (#1631).
 (commit: 80e09a8)

Graph Panel widget: properly initialise the selected state of a graph
(#1631).
 (commit: e96ed32)

Some minor cleaning up.
 (commit: f53ca46)

Graph Panel widget: properly initialise the selected state of a graph
(#1631).
 (commit: e39fbae)

Some minor cleaning up.
 (commit: 558947f)

New snapshot.
 (commit: a32ba37)

libgit2 package: upgraded to version 0.27.1 (#1672).
 (commit: 7c6cefb)

Only build the libgit2 package (#1672).
 (commit: 32c31fc)

Only build the libgit2 package (#1672).
 (commit: 2264fac)

Only build the libgit2 package (#1672).
 (commit: b60dfb6)

libgit2 package: binaries for version 0.27.1 (#1672).
 (commit: 770621f)

Stop building only the libgit2 package (#1672).
 (commit: 83b7695)

Slight updates to our downloads pages (#1672).
 (commit: 93cef9c)

SBML API package: upgraded to version 5.17.0 (#1671).
 (commit: 9ae34dc)

Only build the SBML API package (#1671).
 (commit: 8e8b9d2)

SBML API package: binaries for version 5.17.0 (#1671).
 (commit: 36a6a3c)

Stop building only the SBML API package (#1671).
 (commit: 84664c7)